| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1168 |
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| Symbol | |
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| ID | 6483804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 1164062 |
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| End bp | 1166071 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642736570 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_002040328 |
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| Protein GI | 194444831 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.000129127 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGCTG AGACTATTAA AGATTTTCTC GTCTCCCTTG GCTTTGGTAT TGATGAAGCC
GGATACGAGA AATTTGAATC TGTTCTTGCT GGCGTCACCG CAAATGCCAT AAAAACAGGG
CTGGCGGTGG AAGGTGCGGC GCTGTCCGTT GTTGCGTTTA CGGCGAAAAT TGCCTCCGGT
CTGGATAACC TTTACTGGGC ATCTCAACGC ACCGGCGCGA CGGTTCTGGG GATTCAGTCG
ATTGGCTACG CAGTTTCGCA GGTGGGTGGC AGCGTGGACG CGGCGCGGAG CTCGCTGGAA
AGCCTCTCAC GATTTGTACG TAACAACCCC GGCGCGGAGG GATTTCTTAA CCGCCTGGGT
GTACAGACTC GTGACGCCAG CGGGAACATG CGCGACATGG CTGCTATTTT TACGGGCGTC
GGCCAGAAGC TCAGCAGCAT GCCGTATTAC CGCGCTAACC AGTATGCGCA GATGCTGGGC
ATTGACGAAA ATACCCTTAT GGCGATGCGT CGGGGTATGG GGGGATTCTC CGGGCAGTAC
AGCGCGATGG CGAAGGCCAT CGGTTACGAC TCTCAACAGG CCGCTGTTTC CTCCAACAAA
TTCATGACCT CCCTGCGCGA GTTCGGCGCG ATGGCAGGCA TGGCCCGTGA CAAAATCGGC
TCGAATCTTG CTGGTGGTCT GGCGGGTTCG CTGGACACGC TGCGCCGCCA CATCCTGGAT
AACTTTCCGC GCATCGAGCA GACCCTGACG AAAGCCATAA AAGGCATTCT GGCGCTCGGG
GACATCATCG GGCGGCTGTT CTTCCGGCTT ATTGAGGGGA CGTCAGACCT TATTACCTGG
TGGAAATCAC TCGACAAGCA AACGCGGGAT CTGATCTCGC TGTTTGGCGC GCTGACGATT
GCGCTGCGCA TTCTGAACAG TACGTTCTGG ATGTCGCCGA TTGGCCTGAT TACCGCGCTG
ACCGCCGGTA TCGCGTTACT CTGGGAGGAT TACAGGACCT GGAAGGAAGG CGGTAAGAGC
CTGATTGACT GGGGCAAATG GAAACCAGAA GTCGACGCCG CGCTGAAGAT GGTCCATGAC
CTGCAGGGGG CCATTAATGA CCTGGCGAAA GCGCTGGCGA AGCTGCTCAA CATTGACCCC
AAGTCATGGT CCCTGAAGTG GGATTTCAGC AACTTCATTG ATCAGATGGG CGAGTTCAGC
AAGATGCTGA ATATGATCGC CGACCTGCTC AACGCCATTA AAGACGGTCG CTGGGCCGAT
GCCGCCAGCA TCGGAAAACG GATGCTGAAT CAGGGCGGTG AAAACCCGTC AGCAATGCCG
ATGGTGACCG ACAGCGCCAA CAGTTCCGCT GACTGGATTA AAGAGCACTG GGGATTCGAT
CCCCGCAGCG TAGGCCGAAC GGTTCGCGGC TGGTTTGGGG GTGATGACCC TGAACAACAC
GGACAGTCAG TTAAGCGGCC ACAACCAACA AAAGCTGGCG CTGAGCTGCT GGGATGGATG
CAGCCGATGC TAACCAATCT GGAACACCTA TACCGGCTTC CGGAAGGTTT GCTGCGCAGC
GTGGCCATCA CTGAATCAGG CGGGAATCAG TTTGCAGTTT CCGGCGCCGG CGCTAAAGGC
CTGTTTCAGT TTATGGACGG CACTGCACGA GATATGGGGC TGCGCGGGAA TGATGTTTTC
GATCCGGAGA AGGCTGCGCA GGCTGCAGCA AAATATCTTT CACAGTTGCT GCGGGCGAAT
GGCGGTGACC TGAGCAAGGC GCTGGCGTCA TATAACTGGG GGATCGGGAA TGTACAGAAA
CACGGGATGG CCCTTATGCC TCAGGAAACC CGCAACTACA TTCCGAAGGT ATTAAGCAAC
ATGCCCGCAC CCGGAGCTCA GGTCCAGCAA CAGAACACCT ATCACATTTA CGGTGGTGGT
GATCCGCACT CCGTGGGGAA TCAGGTAGAA CGTCGGCAGC AGTCTGCAAA TGCCCAGCTC
ATGCGCGGCA ATCAAACGAA GGTGGGTTAA
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| Protein sequence | MNAETIKDFL VSLGFGIDEA GYEKFESVLA GVTANAIKTG LAVEGAALSV VAFTAKIASG
LDNLYWASQR TGATVLGIQS IGYAVSQVGG SVDAARSSLE SLSRFVRNNP GAEGFLNRLG
VQTRDASGNM RDMAAIFTGV GQKLSSMPYY RANQYAQMLG IDENTLMAMR RGMGGFSGQY
SAMAKAIGYD SQQAAVSSNK FMTSLREFGA MAGMARDKIG SNLAGGLAGS LDTLRRHILD
NFPRIEQTLT KAIKGILALG DIIGRLFFRL IEGTSDLITW WKSLDKQTRD LISLFGALTI
ALRILNSTFW MSPIGLITAL TAGIALLWED YRTWKEGGKS LIDWGKWKPE VDAALKMVHD
LQGAINDLAK ALAKLLNIDP KSWSLKWDFS NFIDQMGEFS KMLNMIADLL NAIKDGRWAD
AASIGKRMLN QGGENPSAMP MVTDSANSSA DWIKEHWGFD PRSVGRTVRG WFGGDDPEQH
GQSVKRPQPT KAGAELLGWM QPMLTNLEHL YRLPEGLLRS VAITESGGNQ FAVSGAGAKG
LFQFMDGTAR DMGLRGNDVF DPEKAAQAAA KYLSQLLRAN GGDLSKALAS YNWGIGNVQK
HGMALMPQET RNYIPKVLSN MPAPGAQVQQ QNTYHIYGGG DPHSVGNQVE RRQQSANAQL
MRGNQTKVG
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