Gene SNSL254_A1110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1110 
Symbol 
ID6484339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1120913 
End bp1121365 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content47% 
IMG OID642736513 
Producthypothetical protein 
Protein accessionYP_002040272 
Protein GI194442814 
COG category[S] Function unknown 
COG ID[COG3120] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000188427 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.00310953 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATATC AACAACTTGA AAATCTTGAA AGCGGTTGGA AATGGAAATA TCTGGTGAAA 
AAGCACCGCG AAGGGGAGCT GATCACCCGC TACGTGGAAG CCAGTGCTGC CCAGGAAGCC
GTCAATTTGT TGTTGGCCCT CGAAAATGAA CCGGTGCGGG TAAATGTCTG GATAGACAGG
CATATGAATC CTGCCTTGCT TAATCGGATG AAACAAACCA TTCGGGCAAG ACGCAAACGA
CACTTCAATG CGGAACATCA GCATACGCGC AAAAAATCTA TCGATTTAGA GTTTATGGTC
TGGCAGCGTC TGGCGGGCCT TGCGCAGCGA CGCGGTAAAA CATTATCCGA AACGATAGTG
CAACTGATAG AAGACGCGGA GCATAAAGAG AAATATGCCA CGCAAATGAC CACGTTAAAG
CAGGATTTAC AGGCGTTATT AGGCAAGAAG TAA
 
Protein sequence
MKYQQLENLE SGWKWKYLVK KHREGELITR YVEASAAQEA VNLLLALENE PVRVNVWIDR 
HMNPALLNRM KQTIRARRKR HFNAEHQHTR KKSIDLEFMV WQRLAGLAQR RGKTLSETIV
QLIEDAEHKE KYATQMTTLK QDLQALLGKK