Gene SNSL254_A1108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1108 
SymbolfabA 
ID6485268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1118380 
End bp1118898 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content54% 
IMG OID642736511 
Product3-hydroxydecanoyl-(acyl carrier protein) dehydratase 
Protein accessionYP_002040270 
Protein GI194443688 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000139878 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.0118839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGATA AACGCGAATC CTATACAAAA GAAGACCTTC TTGCCTCTGG TCGTGGTGAA 
CTGTTTGGCG CTAAAGGGCC GCAACTCCCT GCGCCGAACA TGCTGATGAT GGACCGCGTC
GTTAAGATGA CCGAAACGGG CGGCAATTTC GACAAAGGCT ATGTCGAAGC CGAGCTGGAT
ATCAATCCGG ATCTATGGTT CTTCGGATGC CACTTTATCG GCGATCCGGT GATGCCCGGT
TGTCTGGGTC TGGATGCTAT GTGGCAATTG GTGGGATTCT ACCTGGGCTG GTTGGGCGGC
GAAGGCAAAG GCCGCGCTCT GGGCGTGGGC GAAGTGAAAT TTACCGGCCA GGTTCTGCCG
ACAGCCAGGA AAGTCACCTA TCGCATTCAT TTCAAACGTA TCGTAAACCG TCGCCTGATC
ATGGGTCTGG CGGACGGTGA GGTTCTGGTG GATGGTCGTC TGATCTATAC CGCACACGAT
TTGAAAGTCG GTTTGTTCCA GGATACTTCC GCGTTCTAA
 
Protein sequence
MVDKRESYTK EDLLASGRGE LFGAKGPQLP APNMLMMDRV VKMTETGGNF DKGYVEAELD 
INPDLWFFGC HFIGDPVMPG CLGLDAMWQL VGFYLGWLGG EGKGRALGVG EVKFTGQVLP
TARKVTYRIH FKRIVNRRLI MGLADGEVLV DGRLIYTAHD LKVGLFQDTS AF