Gene SNSL254_A1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1080 
Symbol 
ID6483069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp1089479 
End bp1089811 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content51% 
IMG OID642736485 
Productphage minor tail protein 
Protein accessionYP_002040244 
Protein GI194446036 
COG category[S] Function unknown 
COG ID[COG4718] Phage-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.282749 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAA CCTTTCACTG GAAAGTTGAC CCGGACATGG GGGTGGATTC GGAACCACAG 
GTGTCGGTGG TGAGGTTCGG TGATGGCTAC GAGCAGCGGC GTGCATCCGG GATCAATAAT 
GACCTGAAAA AATACAGTGT GACTATCCGC GTTGACCGGG AGGATGGTCC GGGACTGGAG 
GGCTTTTTGT CACAGCATAA CGGTGTGAAG GCGTTTTTGT GGACTCCGCC TTACGGATAC 
CGGCAGATTA AGGTTGTCTG CCGGAAATGG AGTGTGAAAG CGGGATTGCT GAAAACAACA 
TTCACCGCGA CATTTGAGCA GGTTATTTCT TAG
 
Protein sequence
MMKTFHWKVD PDMGVDSEPQ VSVVRFGDGY EQRRASGINN DLKKYSVTIR VDREDGPGLE 
GFLSQHNGVK AFLWTPPYGY RQIKVVCRKW SVKAGLLKTT FTATFEQVIS