Gene SNSL254_A1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1062 
Symbol 
ID6485527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp1071995 
End bp1072792 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content46% 
IMG OID642736467 
Productantitermination protein Q 
Protein accessionYP_002040226 
Protein GI194446051 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.125216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.00000357923 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATCTTG AGTCCTTACC GAAATATTTT TCACCTAAAT CCATGATGCC CGGCGCAGTA 
CCATGCGGAA TAACGTCTGA TACGCTGACT ATTACTGACG TAATGGCATC TCTCGGGCTA 
CTTACTGCAA AAGCCGCAGT GGGTATTGAA TTGTATCTGG CAAAAGCCGG GGTTTTATCT 
TCTGAAAATA TCATCGCCTA CATCAGGCAA TTAGCAGAGC AGCGTGCAGA ACGGCATGGG 
GCATTACGGA AAATGGAAAA GGGTAAGCGC TCAAAATTTC TCGACACTAT GGCGCGTTAT 
GTATTTCGCG ATTATTCCCT CAGTGCGGCC AGCTTGGTGA CGTGCAGTAG CTGTCATGGT 
GCTAAATTAA TTGATGCTGA GGTTTTCACG AACAAGGTTA CTTACCCGGA TGGTAAGCCA 
CCAAAATGGG TAAAAGATAC GAAAGGTATT TCTCCGTCCG ACTGGGAGGT GTGGAAATCA 
GTTCGTGAGC AGGTGCGCGT AGTGTGTAAG GCGTGTGATG GCAAAGGCCA TGTGAAAAAT 
GAATGTCGTT GCCGGGGACG CGGAGAAATT CTCGATAAGA AAAAATCTGA GTTGCAGGGC 
GTGCCGGTTT ATAAAAAATG CCCAAGATGC AAGGGAAGAG GCTACCCACG TCTCAAAGAT 
ACCGAGATTT TTAAAGCACT AGGAGTAACG GAAATGGTAT GGCGGTACAA CTATAAACTG 
TTTTTCGATC GGCTGGTGGA GCATTGCCAT ATTGAGGAAT CGTATGCAGA AAAGGTTCTG 
GGAAACGTGA CTCGATGA
 
Protein sequence
MNLESLPKYF SPKSMMPGAV PCGITSDTLT ITDVMASLGL LTAKAAVGIE LYLAKAGVLS 
SENIIAYIRQ LAEQRAERHG ALRKMEKGKR SKFLDTMARY VFRDYSLSAA SLVTCSSCHG 
AKLIDAEVFT NKVTYPDGKP PKWVKDTKGI SPSDWEVWKS VREQVRVVCK ACDGKGHVKN 
ECRCRGRGEI LDKKKSELQG VPVYKKCPRC KGRGYPRLKD TEIFKALGVT EMVWRYNYKL 
FFDRLVEHCH IEESYAEKVL GNVTR