Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1054 |
Symbol | |
ID | 6483113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1067716 |
End bp | 1068465 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642736460 |
Product | putative replication protein |
Protein accession | YP_002040219 |
Protein GI | 194445919 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1484] DNA replication protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.547763 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.000000820302 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAACG TAATCGGTAC TGGCAGTGCG CTTGATCGCC TGAAAAGAAT TATCCCAGCC AGTGTGCAGC CGAAATTCTC GACTGCTGAT GAGTGGCGGG CATGGCAGGA AGCCGAAGGG CGTAAACGCA GTGAAGAGCT TGACAGGATG AATCAGAAAT CCCGCACCGA GAAGATTTTC GGGCGATCTG GCATTCAGGA TCTCCATCGT AGCTGTACGT TTGCTAACTA CGAAGTAAGC GGGGAGGGGC AGCGAAAAGC GTACACGATG GCAAAAAGTT ATGCCCAGAA CTTCGGTAGT GGATTTGCGA GCTTTGTGTT CAGCGGTGGT CCGGGAACCG GGAAAAACCA TCTTGCGGCG GCAATCGGAA ATCATCTGCT GGCCGGCGGT CATAGCGTTC TGGTGGTAAC TATTCCTGAC CTGATGCTCA GGGTTCGTGA GTGCTACGAC GGTGGGCAAT CAGAAGCGTC CCTGCTTGAT GACCTTTGTA AAGTTGACCT GCTGGTACTG GATGAAGTCG GTATTCAGCG CGGAAGCAGT GGTGAGAAGG TCATTCTCAA TCAGGTTATC GATCGCCGTC TCTCATCGAT GCGACCTGTT GGCGTTCTGA CGAATCTTAA CCACGAGGGG CTGTTGGATT CACTGGGCGC GAGGGTTATC GATCGCCTCC AGATGGACGG AGGGATGTGG GTGAATTTTG ACTGGGAAAG CTACCGGAAA AACGTTAGCC ACCTCCGGAT TGTGAAATAA
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Protein sequence | MKNVIGTGSA LDRLKRIIPA SVQPKFSTAD EWRAWQEAEG RKRSEELDRM NQKSRTEKIF GRSGIQDLHR SCTFANYEVS GEGQRKAYTM AKSYAQNFGS GFASFVFSGG PGTGKNHLAA AIGNHLLAGG HSVLVVTIPD LMLRVRECYD GGQSEASLLD DLCKVDLLVL DEVGIQRGSS GEKVILNQVI DRRLSSMRPV GVLTNLNHEG LLDSLGARVI DRLQMDGGMW VNFDWESYRK NVSHLRIVK
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