| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1014 |
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| Symbol | rpsA |
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| ID | 6486393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 1026270 |
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| End bp | 1027943 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642736420 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_002040179 |
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| Protein GI | 194444412 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.535746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAT CTTTTGCTCA ACTCTTTGAA GAATCCTTAA AAGAAATCGA AACCCGCCCG
GGTTCCATCG TTCGTGGTGT TGTTGTTGCT ATCGACAAAG ACGTAGTACT GGTTGACGCC
GGTCTGAAAT CTGAGTCTGC CATTCCGGCT GAGCAGTTCA AAAACGCCCA GGGCGAACTG
GAAATCCAGG TTGGTGACGA AGTTGACGTT GCTCTGGATG CAGTAGAAGA CGGCTTCGGT
GAAACTCTGC TCTCTCGTGA GAAAGCTAAA CGTCACGAAG CATGGATCAC GCTGGAAAAA
GCTTACGAAG ATGCTGAAAC TGTTACCGGT GTTATCAACG GCAAAGTTAA GGGTGGCTTC
ACTGTTGAGC TGAACGGTAT TCGCGCGTTC CTGCCAGGTT CTCTGGTAGA CGTTCGTCCG
GTGCGTGACA CTCTGCACCT GGAAGGCAAA GAGCTTGAAT TCAAAGTAAT CAAGCTGGAC
CAGAAACGTA ACAACGTTGT GGTTTCTCGT CGTGCCGTTA TCGAATCCGA AAACAGCGCA
GAACGCGATC AGCTGCTGGA AAACCTGCAG GAAGGCATGG AAGTTAAAGG TATCGTTAAG
AACCTCACTG ACTACGGTGC ATTCGTTGAT CTGGGCGGCG TTGACGGCCT GCTGCACATC
ACTGATATGG CCTGGAAACG CGTTAAGCAT CCGAGCGAAA TCGTGAACGT TGGCGACGAA
ATCAACGTGA AAGTGCTGAA ATTCGACCGC GAGCGTACCC GTGTATCCCT GGGTCTGAAA
CAGCTGGGCG AAGATCCGTG GGTTGCTATC GCTAAACGTT ATCCGGAAGG TACCAAACTG
ACCGGTCGCG TGACCAACCT GACCGACTAC GGCTGCTTCG TTGAAATCGA AGAAGGCGTT
GAAGGCCTGG TTCACGTTTC CGAAATGGAC TGGACCAACA AAAACATCCA CCCGTCCAAA
GTGGTTAACG TTGGCGACGT AGTGGAAGTG ATGGTTCTGG ATATCGACGA AGAACGTCGT
CGTATCTCCT TAGGGTTGAA GCAGTGCAAA TCTAACCCGT GGCAGCAGTT CGCAGAAACC
CACAACAAGG GCGACCGCGT TGAAGGTAAA ATCAAGTCTA TCACTGACTT CGGTATCTTC
ATCGGCCTGG ACGGCGGCAT CGACGGCCTG GTTCACCTGT CTGACATCTC CTGGAACGTT
GCAGGCGAAG AAGCAGTTCG TGAATACAAA AAAGGCGACG AAATCGCTGC AGTTGTTCTG
CAGGTTGACG CAGAACGTGA ACGTATCTCC TTGGGCGTTA AACAGCTCGC AGAAGATCCG
TTCAACAACT GGGTTGCTCT GAACAAGAAA GGCGCTATCG TAACCGGTAA AGTCACTGCA
GTTGACGCGA AAGGCGCAAC CGTAGAACTG GCTGACGGCG TTGAAGGTTA CCTGCGTGCT
TCTGAAGCAT CCCGTGACCG CGTTGAAGAT GCGACTCTGG TTCTGAGCGT TGGCGACGAC
GTTGAAGCTA AATTCACCGG CGTTGATCGT AAAAACCGCG CAATCAGCCT GTCTGTTCGT
GCGAAAGACG AAGCTGACGA GAAAGATGCC ATCGCAACTG TTAACAAACA GGAAGATGCA
AACTTCTCTA ACAACGCAAT GGCTGAAGCA TTCAAAGCAG CTAAAGGCGA GTAA
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| Protein sequence | MTESFAQLFE ESLKEIETRP GSIVRGVVVA IDKDVVLVDA GLKSESAIPA EQFKNAQGEL
EIQVGDEVDV ALDAVEDGFG ETLLSREKAK RHEAWITLEK AYEDAETVTG VINGKVKGGF
TVELNGIRAF LPGSLVDVRP VRDTLHLEGK ELEFKVIKLD QKRNNVVVSR RAVIESENSA
ERDQLLENLQ EGMEVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PSEIVNVGDE
INVKVLKFDR ERTRVSLGLK QLGEDPWVAI AKRYPEGTKL TGRVTNLTDY GCFVEIEEGV
EGLVHVSEMD WTNKNIHPSK VVNVGDVVEV MVLDIDEERR RISLGLKQCK SNPWQQFAET
HNKGDRVEGK IKSITDFGIF IGLDGGIDGL VHLSDISWNV AGEEAVREYK KGDEIAAVVL
QVDAERERIS LGVKQLAEDP FNNWVALNKK GAIVTGKVTA VDAKGATVEL ADGVEGYLRA
SEASRDRVED ATLVLSVGDD VEAKFTGVDR KNRAISLSVR AKDEADEKDA IATVNKQEDA
NFSNNAMAEA FKAAKGE
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