Gene SNSL254_A0917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0917 
Symbol 
ID6483614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp924326 
End bp925864 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content53% 
IMG OID642736328 
Productglutathione-binding protein GsiB 
Protein accessionYP_002040088 
Protein GI194444439 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAT TTATTACGCA TAAATGGCTG GCGGCGCTGG GACTGGCCTC ATCCATTGCG 
GCTTTTCCGG CCCTGGCGGC CAAAGATGTG GTGGTGGCGG TAGGGTCTAA TTTCACCACG
CTCGATCCGT ATGACGCCAA CGATACACTC TCGCAGGCGG TGGCGAAGTC ATTTTATCAG
GGGCTGTTTG GCCTGGATAA AGACATGAAG GTAAAAAACG TCCTGGCGAA AGGCTATACC
GTTTCTGATG ACGGTCTGAC CTACACCATT ACCCTACGAC AGGGGGTGAA ATTTCAGGAC
GGCGCGGATT TTGATGCGGC GGCGGTAAAA GCGAATCTCG ATCGCGCCAG CAATCCGGAT
AACCACCTCA AGCGTTATAA CCTGTATAAA AATATCGCAA AAACGGAGGT TGTCGATCCG
GCAACGGTAA AAATTACCCT GAAACAGCCG TTCTCCGCTT TCATTAATAT TCTGGCGCAC
CCGGCGACGG CGATGATCTC GCCGCAAGCG CTGGAAAAAT ATGGCAAGGA TATTGGTTTT
CATCCGGTCG GTACCGGTCC ATACCAGCTT GAAACCTGGA ATCAGACCGA CTTTGTCAAA
GTGAAAAAGT TCGCCGGTTA CTGGCAGCAG GGCTTACCCA AGCTGGATTC TATTACCTGG
CGTCCGGTTA CTGACAACAA TACCCGCGCG GCGATGCTGC AAACCGGCGA AGCGCAATTT
GCTTTTCCTA TCCCTTATGA GCAGGCCGCG TTACTGGCGA AAAATAAAAA CCTCGAACTG
GTCGCCAGCC CGTCCATTAT GCAGCGTTAT ATCAGTATGA ATGTGACGCA GAAGCCGTTT
GATAATCCTA AGGTGCGTGA GGCGTTGAAT TACGCTATCA ATCGTCAGGC GCTGGTTAAA
GTGGCGTTTG CCGGATACGC CACGCCGGCG ACGGGCGTGG TGCCGCCGTC GATAGCCTAT
GCGCAAAGCT ATCAGCCGTG GCCCTATGAT CCGGCTAAAG CGCGCGAACT GTTGAAAGAG
GCGGGGTATC CAGACGGTTT CAGTACCACG CTGTGGTCAT CGCACAACCA TAGCACCGCG
CAAAAAGTGT TGCAGTTTAC CCAACAGCAA CTGGCGCAGA TTGGCGTTAA AGCCCGGATA
ACCGCGATGG ACGCCGGCCA GCGCGCCGCG GAAGTCGAGG GCAAAGGGCA AAAAGAGAGC
GGCGTGCGAA TGTTCTATAC AGGCTGGTCG GCGTCGACGG GCGAAGCTGA CTGGGCGTTA
TCGCCGCTCT TCGCATCACA AAACTGGCCG CCGACGCAGT TTAATACCGC TTTTTACAGC
AACAAGCAGG TCGACAGCGA TTTGGCGGCG GCCTTAAAGA CCAACGATCC GCAGGAGAAA
ACACGATTGT ACAAAGAGGC GCAGGATATT ATCTGGAAAG AGTCGCCCTG GATACCGTTG
GTGGTGGAGA AATTGGTTTC TGCGCACAGT AAAAATTTGA CCGGTTTCTG GATTATGCCG
GATACCGGTT TCAGCTTTGA CGATGCGGAT TTGAAGTAA
 
Protein sequence
MTQFITHKWL AALGLASSIA AFPALAAKDV VVAVGSNFTT LDPYDANDTL SQAVAKSFYQ 
GLFGLDKDMK VKNVLAKGYT VSDDGLTYTI TLRQGVKFQD GADFDAAAVK ANLDRASNPD
NHLKRYNLYK NIAKTEVVDP ATVKITLKQP FSAFINILAH PATAMISPQA LEKYGKDIGF
HPVGTGPYQL ETWNQTDFVK VKKFAGYWQQ GLPKLDSITW RPVTDNNTRA AMLQTGEAQF
AFPIPYEQAA LLAKNKNLEL VASPSIMQRY ISMNVTQKPF DNPKVREALN YAINRQALVK
VAFAGYATPA TGVVPPSIAY AQSYQPWPYD PAKARELLKE AGYPDGFSTT LWSSHNHSTA
QKVLQFTQQQ LAQIGVKARI TAMDAGQRAA EVEGKGQKES GVRMFYTGWS ASTGEADWAL
SPLFASQNWP PTQFNTAFYS NKQVDSDLAA ALKTNDPQEK TRLYKEAQDI IWKESPWIPL
VVEKLVSAHS KNLTGFWIMP DTGFSFDDAD LK