Gene SNSL254_A0884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0884 
SymboldinG 
ID6482359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp891476 
End bp893620 
Gene Length2145 bp 
Protein Length714 aa 
Translation table11 
GC content55% 
IMG OID642736296 
ProductATP-dependent DNA helicase DinG 
Protein accessionYP_002040056 
Protein GI194445323 
COG category[L] Replication, recombination and repair
[K] Transcription 
COG ID[COG1199] Rad3-related DNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTGA CCGCTGCGCT GAAAGCGCAA ATCGCCGCCT GGTATAAGGC GCTTCAGGAA 
CAGATTCCCG ACTTTATTCC CCGTGCGCCG CAGCGGCAGA TGATTGCTGA CGTCGCCAGA
ACGCTGGCCG GGGAAGAAGG GAGACATCTG GCTATTGAAG CGCCGACCGG CGTCGGGAAA
ACCCTCTCCT ATCTTATTCC CGGTATCGCC ATTGCCCGGG AAGAGCAAAA AACACTGGTG
GTCAGTACCG CTAACGTGGC GTTACAGGAT CAGATCTTTA GCAAAGATTT GCCGCTGCTA
CGAAAAATCA TCCCCGATCT GCGCTTTACC GCCGCCTTTG GCCGCGGGCG TTACGTGTGT
CCGCGAAACC TGGCGGCGCT CGCCAGTAGC GAGCCTACGC AGCAGGATCT GCTCGCCTTT
CTTGATGACG AACTGACGCC TAACAACCAG GAAGAGCAAA AGCGTTGCGC CAGGCTGAAA
GGGGATCTTG ACGGTTACAA ATGGGATGGT CTGCGGGATC ATACCGACAT TGCTATTGAC
GACGATCTGT GGCGGCGATT AAGTACCGAT AAAGCCAGTT GTCTGAACCG CAACTGTCAC
TATTACCGCG AATGTCCATT CTTTGTCGCC CGACGTGAAA TACAGGAAGC GGAAGTCGTG
GTGGCGAATC ACGCGCTGGT AATGGCGGCG ATGGAAAGTG AAGCCGTACT GCCGGAACCA
AAGCATCTGC TGTTGGTACT GGATGAAGGT CATCATCTGC CCGATGTCGC TCGCGATGCG
CTGGAGATGA GCGCGGAAAT TACCGCCTCC TGGTATCGCT TGCAACTGGA TCTGTTCAGC
AAACTGGTGG CGACCTGCAT GGAGCAATTT CGCCCTAAAA CCACGCCGCC GTTAGCGAAC
CCTGAGCGAC TTAACGCCCA TTGCGAGGAG GTATACGAAC TGATCGCCTC GCTCAATGCC
ATTCTTAATC TGTATATGCC CGCAGCGCAG GAGGCGGAGC ACCGTTTTGC AATGGGCGAG
TTGCCTGATG AGGTCATGGA AATCTGCCAG CGACTGGCGA AGCTGACCGA GACGCTGCGT
GGGCTGGCGG AATCCTTTCT CAACGATCTC AGCGAAAAAA CCGGGTCGCA CGATATTGTG
CGTTTGCATC GGGTGATTTT ACAGATGAAC CGGGCGCTGG GAATGTTCGA GGCGCAAAGT
AAATTATGGC GGCTGGCTTC GATGGCGCAG TCTTCAGGCG CGCCGGTGTC CAAATGGGCG
ACGCGTGAAA TACGCGAAGG GCAACTCCAC GTCTGGTTCC ATTGTGTCGG TATCCGCGTC
AGCGATCAGC TGGAAAGATT GTTATGGCGC AGCGTACCGC ACATTATTGT CACCTCGGCG
ACACTGCGCT CGCTCAATAG CTTTTCGCGC CTGCAGGAAA TGAGCGGCTT AAAAGAAAAA
GCCGGCGACC GCTTTGTGGC GCTGGATTCG CCGTTTAATC ATGTGGAACA GGGGAAACTG
GTGATTCCTC AAATGCGCTA CGAACCCACT ATTGATAACG AAGAGCAGCA TATTGCCGAA
ATGGCGGCCT ATTTTCGCGA GCAACTGGAG AGCAAAAAAC ATCATGGTAT GCTGGTACTG
TTCGCCAGCG GGCGGGCGAT GCAGCGTTTT CTGGAGCATG TCGCTGATGT ACGCTTACTC
CTCCTGGTCC AGGGCGACCA GCCGCGTTAC CGGCTGGTGG AGCTGCACCG TAAACGGGTG
GAGAGCGGCG AACGTAGCGT GCTGGTTGGG CTTCAGTCTT TTGCCGAAGG GCTGGATCTT
AAAGGCGAGC TGCTGACGCA AGTCCATATC CATAAAATTG CCTTTCCGCC GATCGACAGC
CCGGTCGTGA TCACCGAAGG CGAATGGCTA AAAAGCCTGA ATCGTTATCC GTTTGAGGTA
CAAAGCTTAC CAAGCGCGTC TTTTAATTTA ATTCAGCAGG TAGGGCGATT GATCCGTAGC
CACGCCTGTC GGGGAGAAGT GGTCATTTAT GATAAGCGTT TGTTGACCAA AAACTACGGA
CAGCGTTTAC TGAATGCCTT ACCTGTTTTT CCGATAGAGC AGCCTGCCGT GCCAGACGTT
ATAGTAAAAC CAAAAGCAAA ACCTGCACGC CGCCGACGGC GTTAA
 
Protein sequence
MALTAALKAQ IAAWYKALQE QIPDFIPRAP QRQMIADVAR TLAGEEGRHL AIEAPTGVGK 
TLSYLIPGIA IAREEQKTLV VSTANVALQD QIFSKDLPLL RKIIPDLRFT AAFGRGRYVC
PRNLAALASS EPTQQDLLAF LDDELTPNNQ EEQKRCARLK GDLDGYKWDG LRDHTDIAID
DDLWRRLSTD KASCLNRNCH YYRECPFFVA RREIQEAEVV VANHALVMAA MESEAVLPEP
KHLLLVLDEG HHLPDVARDA LEMSAEITAS WYRLQLDLFS KLVATCMEQF RPKTTPPLAN
PERLNAHCEE VYELIASLNA ILNLYMPAAQ EAEHRFAMGE LPDEVMEICQ RLAKLTETLR
GLAESFLNDL SEKTGSHDIV RLHRVILQMN RALGMFEAQS KLWRLASMAQ SSGAPVSKWA
TREIREGQLH VWFHCVGIRV SDQLERLLWR SVPHIIVTSA TLRSLNSFSR LQEMSGLKEK
AGDRFVALDS PFNHVEQGKL VIPQMRYEPT IDNEEQHIAE MAAYFREQLE SKKHHGMLVL
FASGRAMQRF LEHVADVRLL LLVQGDQPRY RLVELHRKRV ESGERSVLVG LQSFAEGLDL
KGELLTQVHI HKIAFPPIDS PVVITEGEWL KSLNRYPFEV QSLPSASFNL IQQVGRLIRS
HACRGEVVIY DKRLLTKNYG QRLLNALPVF PIEQPAVPDV IVKPKAKPAR RRRR