Gene SNSL254_A0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0870 
Symbol 
ID6484198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp877711 
End bp878415 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content50% 
IMG OID642736282 
Productmembrane protein 
Protein accessionYP_002040042 
Protein GI194444921 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.484875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGAT TTCCACGATC TGATTCAATA GTGCAGGCAC GGTCCGGCCT GCAGACCTAT 
ATGGCGCAAG TGTATGGCTG GATGACGGTC GGACTGTTAC TGACCGCGTT TATCGCGTGG
TATGCGGCTA ATACGCCAGC CGTCATGATG TTTGTCTTTT CCAGTAAGAT CACCTTCTTT
GGCTTAATTA TTGCCCAGCT TGCGCTGGTG TTTGTTCTGT CGGGACTGGT GCATAAACTT
AGCGCCGGAA TGGCGACGAC GCTGTTTATG CTCTATTCGG CGCTAACCGG ATTGACGTTA
TCCAGTATTT TTATCGTTTA CACCTACTCC TCTATCGCCA GCACGTTTGT GGTGACGGGG
GGAATGTTTG GCGCCATGAG CCTGTACGGG TACACCACTA AACGCGATCT TAGCGGTTTC
GGCAACATGC TGTTTATGGC GCTTATTGGT ATCGTTCTGG CGTCGCTGGT CAATTTCTGG
CTGAAGAGTG AAGCGCTGAT GTGGGCGGTA ACCTATATCG GGGTGGTGGT GTTTGTCGGT
CTGACCGCCT ATGACACGCA GAAACTGAAA AATATCGGCG AGCAAATAGA TACCCGCGAT
AGCGCTAATC TGCGTAAATA TTCGATTCTC GGCGCGTTAA CGCTGTACCT GGACTTTATC
AACCTGTTCC TGATGTTACT GCGTATTTTT GGTAATCGCC GCTAA
 
Protein sequence
MDRFPRSDSI VQARSGLQTY MAQVYGWMTV GLLLTAFIAW YAANTPAVMM FVFSSKITFF 
GLIIAQLALV FVLSGLVHKL SAGMATTLFM LYSALTGLTL SSIFIVYTYS SIASTFVVTG
GMFGAMSLYG YTTKRDLSGF GNMLFMALIG IVLASLVNFW LKSEALMWAV TYIGVVVFVG
LTAYDTQKLK NIGEQIDTRD SANLRKYSIL GALTLYLDFI NLFLMLLRIF GNRR