Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0825 |
Symbol | |
ID | 6485963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 829271 |
End bp | 829816 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642736237 |
Product | fumarate hydratase I, beta subunit |
Protein accession | YP_002039997 |
Protein GI | 194444238 |
COG category | [C] Energy production and conversion |
COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain |
TIGRFAM ID | [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.159914 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGAAT TAACATTACC ATTAACTAAA GAGAAAGCGA AAACTCTTAA GGTCGGCGAT ATATTATTTC TCACTGGATT TGCTTACACC TGCCGTGACG CCGCGCATAA AAAAATCGAA GTAGCGCTTA GTAACGGAGA AAAATCACCG GTCGATTTTC AAAACCAAAC GATTTACTAT GCTGGCCCCT GCCCTGCCAG ACCTGGTTTA CCTATTGGCT CCAACGGTCC TACAACGGCC GCGCGTATGG ACCCATTTGT AGAAATGATG TTTCAACAAG GGGCAACTGC GTTTCTTGGC AAAGGCGATC GTGCTGATTA TGTCGCTGAG CTTTGTAAAA AATACGGTGG GGTTTCGCTA CTCGGGATTG GAGGAGCGTC TGCAATTAAT ACAAAACATG TTAAATCAGT AGAAATTGTT GCCTACGAAG AATTAGGAAC AGAATCCATT AAGAAGTTAT ATTTTGACCG CTATAGAGTC ATTGTAGGAA TTGATTCGGA AGGAAATACT CTCCAGAAGC AGGAAGTATC CAAGTACGCC AAATAA
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Protein sequence | MMELTLPLTK EKAKTLKVGD ILFLTGFAYT CRDAAHKKIE VALSNGEKSP VDFQNQTIYY AGPCPARPGL PIGSNGPTTA ARMDPFVEMM FQQGATAFLG KGDRADYVAE LCKKYGGVSL LGIGGASAIN TKHVKSVEIV AYEELGTESI KKLYFDRYRV IVGIDSEGNT LQKQEVSKYA K
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