Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0796 |
Symbol | sucB |
ID | 6484060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 809172 |
End bp | 810380 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642736208 |
Product | dihydrolipoamide succinyltransferase |
Protein accession | YP_002039974 |
Protein GI | 194444650 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00078998 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 0.104109 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAGCG TAGATATTCT TGTTCCCGAC CTGCCTGAGT CCGTAGCGGA CGCGACCGTC GCCACCTGGC ATAAAAAACC GGGCGATGCG GTTGTTCGTG ACGAAGTGCT GGTAGAAATC GAAACTGACA AAGTGGTACT GGAAGTACCG GCATCAGCGG ACGGCATTCT GGATGCGGTT CTGGAAGAGG AGGGGACGAC TGTCACCTCT CGCCAGATCC TGGGTCGCCT GCGTGAAGGA AACAGCGCGG GTAAAGAGAC CAGCGCGAAA TCTGAAGAGA AAGCGTCTAC GCCGGCACAG CGCCAGCAGG CGTCGCTGGA AGAACAAAAC AACGATGCGC TCAGCCCGGC GATCCGTCGC CTGCTGGCTG AACACAATCT GGAAGCCAGC GCCATTAAAG GCACTGGTGT GGGTGGGCGT CTGACCCGTG AAGATGTGGA AAAACATCTG GCGAAAGGCG AGTCTAAAGC ACCCGCTGTT GAACCTGCAG CACAACCCGC TCTGGGCGCG CGCGGCGAAA AACGCGTGCC AATGACCCGC CTGCGCAAGC GCGTGGCCGA GCGTCTACTG GAAGCGAAAA ATTCCACCGC CATGCTGACG ACCTTCAATG AAGTCAACAT GAAGCCGATT ATGGATTTGC GTAAGCAGTA TGGCGAAGTG TTTGAAAAAC GTCATGGTAT CCGCCTGGGC TTTATGTCCT TCTACGTGAA AGCGGTAGTG GAAGCGCTGA AGCGTTATCC GGAAGTGAAC GCCTCTATCG ACGGCGATGA CGTGGTGTAT CACAACTACT TTGATGTGAG CATGGCGGTG TCTACGCCGC GCGGCCTGGT CACGCCGGTC CTGCGTGACG TGGATACGCT GGGCATGGCT GACATCGAGA AAAAAATTAA AGAACTGGCT GTCAAAGGCC GCGACGGCAA GCTGACCGTA GAAGACCTGA CCGGTGGTAA CTTTACCATT ACCAACGGCG GCGTATTCGG TTCGCTGATG TCTACCCCGA TCATCAACCC GCCGCAGAGC GCGATTCTGG GAATGCATGC TATTAAAGAC AGGCCGATGG CGGTGGATGG CAAGGTGGAA ATCCTGCCGA TGATGTACTT GGCGCTCTCT TACGATCATC GCCTGATCGA TGGTCGCGAA TCCGTGGGCT TCCTGGTCAC CATCAAAGAG TTGCTGGAAG ATCCGACCCG TCTGCTGTTG GACGTGTAG
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Protein sequence | MSSVDILVPD LPESVADATV ATWHKKPGDA VVRDEVLVEI ETDKVVLEVP ASADGILDAV LEEEGTTVTS RQILGRLREG NSAGKETSAK SEEKASTPAQ RQQASLEEQN NDALSPAIRR LLAEHNLEAS AIKGTGVGGR LTREDVEKHL AKGESKAPAV EPAAQPALGA RGEKRVPMTR LRKRVAERLL EAKNSTAMLT TFNEVNMKPI MDLRKQYGEV FEKRHGIRLG FMSFYVKAVV EALKRYPEVN ASIDGDDVVY HNYFDVSMAV STPRGLVTPV LRDVDTLGMA DIEKKIKELA VKGRDGKLTV EDLTGGNFTI TNGGVFGSLM STPIINPPQS AILGMHAIKD RPMAVDGKVE ILPMMYLALS YDHRLIDGRE SVGFLVTIKE LLEDPTRLLL DV
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