Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0790 |
Symbol | gltA |
ID | 6485756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 800565 |
End bp | 801848 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642736202 |
Product | type II citrate synthase |
Protein accession | YP_002039968 |
Protein GI | 194445649 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.148883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.115118 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATA CAAAGGCAAA AATCACCCTT ACTGGTGACA CTGCTATTGA ACTGGATGTG CTAAAAGGTA CACTCGGTCA AGATGTTATT GATATTCGTA GTCTCGGTTC AAAAGGAGTT TTTACTTTTG ACCCTGGTTT CACCTCTACC GCATCCTGCG AATCTAAAAT CACCTTCATC GACGGCGACG AAGGCATTTT GTTGCATCGC GGTTTCCCGA TTGACCAGCT TGCTACCGAT TCCAACTATC TGGAAGTCTG TTACATCCTG CTGTACGGCG AAAAACCGAC GCAGGAAGAG TATGACGAGT TCAGAACGAC AGTCACCCGC CATACGATGA TCCATGAGCA AATCACTCGC CTGTTCCATG CTTTCCGTCG CGACTCACAT CCGATGGCGG TAATGTGCGG GATCACTGGC GCGCTGGCAG CGTTCTACCA CGACTCGCTG GATGTGAACA ATCCGCGCCA CCGTGAAATC GCGGCGTTCC GCCTGCTGTC CAAAATGCCG ACCATGGCGG CGATGTGTTA CAAATATTCA ATCGGTCAGC CGTTTGTTTA TCCGCGCAAC GACCTTTCCT ACGCCGGTAA CTTCCTGAAC ATGATGTTCT CCACGCCGTG TGAAACCTAT GAAGTGAATC CGGTACTAGA GCGCGCGATG GACCGTATTC TGATCCTGCA CGCTGACCAT GAGCAGAACG CCTCAACGTC AACGGTACGT ACCGCAGGTT CAAGCGGCGC CAACCCATTC GCCTGCATTG CCGCCGGGAT CGCCTCCCTG TGGGGACCCG CGCACGGCGG CGCCAACGAA GCCGCGCTGA AAATGCTGGA AGAAATCAGC TCTGTTAAAC ACATTCCGGA ATTTGTTCGC CGTGCGAAAG ACAAGAATGA TTCTTTCCGC CTGATGGGCT TCGGTCACCG TGTTTACAAA AACTACGATC CGCGCGCCAC CGTGATGCGT GAAACCTGCC ACGAAGTGCT GAAAGAGCTG GGCACCAAAG ACGATCTGCT GGAAGTGGCG ATGGAGCTTG AGCACATTGC GCTCAACGAC CCGTACTTCA TCGAGAAGAA ACTGTACCCG AACGTAGACT TCTACTCCGG CATCATTCTG AAAGCGATGG GCATTCCATC TTCGATGTTC ACCGTGATCT TCGCCATGGC GCGTACCGTT GGCTGGATTG CACACTGGAA TGAAATGCAC ACTGACGGCA TGAAAATCGC CCGTCCTCGT CAGCTGTATA CCGGCTACGA TAAACGCGAT TTTAAATCGG CGCTGAAGCG TTAA
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Protein sequence | MADTKAKITL TGDTAIELDV LKGTLGQDVI DIRSLGSKGV FTFDPGFTST ASCESKITFI DGDEGILLHR GFPIDQLATD SNYLEVCYIL LYGEKPTQEE YDEFRTTVTR HTMIHEQITR LFHAFRRDSH PMAVMCGITG ALAAFYHDSL DVNNPRHREI AAFRLLSKMP TMAAMCYKYS IGQPFVYPRN DLSYAGNFLN MMFSTPCETY EVNPVLERAM DRILILHADH EQNASTSTVR TAGSSGANPF ACIAAGIASL WGPAHGGANE AALKMLEEIS SVKHIPEFVR RAKDKNDSFR LMGFGHRVYK NYDPRATVMR ETCHEVLKEL GTKDDLLEVA MELEHIALND PYFIEKKLYP NVDFYSGIIL KAMGIPSSMF TVIFAMARTV GWIAHWNEMH TDGMKIARPR QLYTGYDKRD FKSALKR
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