Gene SNSL254_A0774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0774 
Symbol 
ID6486515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp784991 
End bp785725 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content60% 
IMG OID642736186 
ProductLamB/YcsF family protein 
Protein accessionYP_002039952 
Protein GI194444673 
COG category[R] General function prediction only 
COG ID[COG1540] Uncharacterized proteins, homologs of lactam utilization protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.846244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTG ATTTAAATGC GGATGTGGGC GAAGGTTGCG CCAGCGACAG CGAATTATTA 
ACGCTGGTCT CCTCCGCCAA TATCGCCTGT GGTTTTCACG CCGGTGATGC GCAAACCATG
CTGACCTGTG TGCGCGAGGC GCTGAAAAAC GGCGTGGCGA TCGGCGCGCA TCCCAGCTTT
CCGGATCGGG ATAATTTTGG GCGGACGGCG ATGGTTTTGC CGCCGGAAAC GGTATACGCC
CAGACGCTGT ACCAAATCGG CGCGCTGGGG GCGATTGTCC AGGCGCAAGG CGGCGTGATG
CGCCATGTCA AACCGCACGG TATGCTCTAT AACCAGGCGG CGAAAGATCC CCGTCTGGCA
CAGGCGATTG CGAAAGCGGT ACACGACTAT GATCCGTCAC TGATACTGGT TGGACTGGCG
GGAAGCGAGC TGATCCGGGC CGGTGAACGC CATCGCCTGG TGACGCGGCA GGAGGTGTTT
GCCGATCGCG GCTATCAGGC CGACGGTAGC CTGGTGCCGC GCACGCAACC TGGCGCGCTG
ATTCACGACG AAGAGCAGGC GCTGGCGCAA ACGCTGGATA TGGTACAAGC CGGGAGAGTG
AAAAGCGTTA CTGGCGTGTG GACGACTGTC ACGGCGCAAA CGGTGTGCAT TCATGGCGAC
GGCGAGTATG CGCTTGCATT CGCACGCAGG CTACGCGCCG CGTTCAATGC GCGTAATATA
CACGTTATTG CCTGA
 
Protein sequence
MNIDLNADVG EGCASDSELL TLVSSANIAC GFHAGDAQTM LTCVREALKN GVAIGAHPSF 
PDRDNFGRTA MVLPPETVYA QTLYQIGALG AIVQAQGGVM RHVKPHGMLY NQAAKDPRLA
QAIAKAVHDY DPSLILVGLA GSELIRAGER HRLVTRQEVF ADRGYQADGS LVPRTQPGAL
IHDEEQALAQ TLDMVQAGRV KSVTGVWTTV TAQTVCIHGD GEYALAFARR LRAAFNARNI
HVIA