Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0774 |
Symbol | |
ID | 6486515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 784991 |
End bp | 785725 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642736186 |
Product | LamB/YcsF family protein |
Protein accession | YP_002039952 |
Protein GI | 194444673 |
COG category | [R] General function prediction only |
COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 0.846244 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATTG ATTTAAATGC GGATGTGGGC GAAGGTTGCG CCAGCGACAG CGAATTATTA ACGCTGGTCT CCTCCGCCAA TATCGCCTGT GGTTTTCACG CCGGTGATGC GCAAACCATG CTGACCTGTG TGCGCGAGGC GCTGAAAAAC GGCGTGGCGA TCGGCGCGCA TCCCAGCTTT CCGGATCGGG ATAATTTTGG GCGGACGGCG ATGGTTTTGC CGCCGGAAAC GGTATACGCC CAGACGCTGT ACCAAATCGG CGCGCTGGGG GCGATTGTCC AGGCGCAAGG CGGCGTGATG CGCCATGTCA AACCGCACGG TATGCTCTAT AACCAGGCGG CGAAAGATCC CCGTCTGGCA CAGGCGATTG CGAAAGCGGT ACACGACTAT GATCCGTCAC TGATACTGGT TGGACTGGCG GGAAGCGAGC TGATCCGGGC CGGTGAACGC CATCGCCTGG TGACGCGGCA GGAGGTGTTT GCCGATCGCG GCTATCAGGC CGACGGTAGC CTGGTGCCGC GCACGCAACC TGGCGCGCTG ATTCACGACG AAGAGCAGGC GCTGGCGCAA ACGCTGGATA TGGTACAAGC CGGGAGAGTG AAAAGCGTTA CTGGCGTGTG GACGACTGTC ACGGCGCAAA CGGTGTGCAT TCATGGCGAC GGCGAGTATG CGCTTGCATT CGCACGCAGG CTACGCGCCG CGTTCAATGC GCGTAATATA CACGTTATTG CCTGA
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Protein sequence | MNIDLNADVG EGCASDSELL TLVSSANIAC GFHAGDAQTM LTCVREALKN GVAIGAHPSF PDRDNFGRTA MVLPPETVYA QTLYQIGALG AIVQAQGGVM RHVKPHGMLY NQAAKDPRLA QAIAKAVHDY DPSLILVGLA GSELIRAGER HRLVTRQEVF ADRGYQADGS LVPRTQPGAL IHDEEQALAQ TLDMVQAGRV KSVTGVWTTV TAQTVCIHGD GEYALAFARR LRAAFNARNI HVIA
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