Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0764 |
Symbol | |
ID | 6482440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 771625 |
End bp | 774309 |
Gene Length | 2685 bp |
Protein Length | 894 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642736176 |
Product | sensor protein KdpD |
Protein accession | YP_002039942 |
Protein GI | 194444856 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 0.945525 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACG AACCCTTGCG TCCTGATCCG GATCGCTTGT TGGAACAAAC GCCCCCGCCC CACCGGGGGA AGTTGAAAAT TTTCTTCGGC GCCTGCGCAG GCGTCGGAAA AACCTGGGCG ATGCTGGCGC AAGCGCAGCG GCTGCGAGCG CAGGGGCTGG ATGTGGTGAT CGGCGTTGTA GAGACGCACG GCCGTGAAGA GACCGCCGCA CTACTTGACG GGCTGACCAT TCTGCCGCCA AAACGTCACT CGCACCGGGG GCGGCAAATT CGCGAATTTG ACCTGGATGC CGCCCTCGCC CGGCGTCCGG CGCTGATTTT AATGGATGAG CTGGCGCACA GTAACGCGCC TGGCTCACGC CATCCTAAGC GCTGGCAGGA TATTGAAGAG CTGCTGGAAG CGGGAATCGA CGTTTTCACC ACCGTGAACG TACAACATCT GGAAAGTCTG AACGATGTGG TGAGCGGCGT CACGGGGATT CAGGTGCGCG AAACCGTCCC CGATCCCTTT TTTGATGCCG CTGATGAAGT CGTACTGGTC GATCTGCCGC CCGACGATCT GCGCCAACGG CTCAACGAAG GTAAAGTGTA TATCGCCGGT CAGGCGGAAC GCGCTATTGA ACATTTTTTC CGCAAGGGCA ATCTGATCGC CCTCCGCGAG CTGGCGCTAC GCCGGACAGC CGATCGCGTG GACGATCAGA TGCGCGCCTG GCGCGCGCAT CCGGGCGAAG AAAAAGTATG GCATACCCGC GATGCTATTT TACTGTGTAT CGGGCATAAC ACCGGCAGCG AAAAACTGGT GCGTACCGCG GCGCGTCTGG CCTCCCGGCT CGGCAGCGTC TGGCACGCCG TCTATGTCGA AACGCCAACG TTACACCGCT TACCGGAAAA ACAACGGCGG GCTATTTTAA GCGCGCTGCG CCTGGCGCAG GAGCTTGGCG CGGAAACCGC CACCCTGTCC GATCCCGCCG AAGAGAAAGC GGTCGTGCGC TATGCCCGCG AGCATAATCT GGGGAAAATC GTCATGGGCC GCCCGGCGTC GCGACGCTGG TGGCGACGTG ACGCTTTCGC CGACCGTCTT GCCAGGCGCG CGCCGGATCT CGATCAGGTG ATCGTCGCGC TGGAAGAGCC GCCAGCCCGC GCATTGGCGC AAACGCCTGA TAACCGTCCT TTTAAAGAGA AATGGCGTGG GCAGATTCAG GGCTGTCTGG TCGCCGTGGC GCTTTGCGCC ATCACCACGC TTATCGCTAT GCAGTGGCTT GTCACCTTCG ACGCCGCCAA TCTGGTGATG CTCTATTTGC TGGGCGTAGT GGTGATTGCG CTGCTTTACG GGCGCTGGCC GTCGGTGGTG GCGACGGTGA TTAACGTGGC GAGTTTCGAT CTCTTTTTTA TCGCGCCACG CGGTACGCTC GCCGTTTCGG ACGTGCAGTA TCTGCTGACT TTTGCCGTGA TGCTGACGGT TGGTCTGGTG ATTGGCAATC TTACTGCCGG GGTGCGCTAT CAGGCGCGCG TCGCCCGTTA TCGGGAACAG CGTACCCGTC ATTTATATGA AATGTCTAAA GCGCTGGCCG TCGGGCGTAG TGAACATGAT ATCGCCGCGA CCAGCGAGCG GTTTATCGCC TCGACGTTTC AGGCGCGCAG CCAAATTTTA TTACCTGATG CTAACGGTAA GTTGCTGCCT CTCACCCACC AGCAAGGCAT GACGCCGTGG GACGACGCAA TTGCGCGCTG GAGTTTTGAT AAAGGCCAGC CTGCCGGCGC AGGCACCGAT ACCCTCCCTG GCGTGCCTTA TCAAATCCTG CCGCTGAAAA GCGCCGATAA AACGTACGGT CTGGCTATCG TCGAACCGGG TAATTTGCGT CAGTTAATGG TGCCGGAGCA GCAACGCCTG CTGGAAACAT TTACTCTGCT TGTCGCCAAC GCGCTGGAAC GACTGACGCT GACCGCCAGC GAAGAACAGG CGCGTCTCGC CAGCGAGCGC GAAAGTATTC GCAACGCTCT GCTGGCGGCA CTGTCGCATG ATTTACGCAC GCCGCTGACG GTATTGTTTG GCCAGGCGGA AATTTTGACG CTGGATTTAG CCAGCGCAGG ATCGCCCCAC GCGCGTCAGG CCAGTGAAAT CCGCCAGCAT ATTCTCAACA CCACCCGGCT GGTGAATAAT TTGCTGGATA TGGCGCGTAT TCAGTCCGGC GGGTTTAATC TTAAAAAAGA GTGGCTGACG CTGGAAGAGG TCGTCGGGAG CGCGTTACAG ATGTTAGAGC CGGGTTTATT GCATCCGATT ACATTGTCGC TGCCGCAACA GTTAACGCTT ATCCATGTCG ATGGCCCCTT ATTTGAGCGC GTCCTGATCA ACTTGCTGGA AAACGCCGTT AAGTACGCCG GGCCGCAGGC CAGTATCGGC ATTGATGCTG CGGTTAAGGA CGATCGTTTA CAACTGGATG TCTGGGATAA CGGGCCGGGT ATTCCTGCGG GGCAAGAACA GAAGATTTTC GATAAGTTCG CCCGCGGCAA CAAAGAGTCC GCCGTCCCCG GCGTGGGGCT GGGGCTGGCG ATTTGCCATG CTATCGTAGA GGTACACGGC GGCACGCTTA CCGCCTATAA TCGACCGCAG GGCGGCGCCT GTTTCCGTGT GACGCTGCCG CAAGGAAAGC CACCTGAACT TGATGATTTT CATGAGGATA TGTGA
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Protein sequence | MNDEPLRPDP DRLLEQTPPP HRGKLKIFFG ACAGVGKTWA MLAQAQRLRA QGLDVVIGVV ETHGREETAA LLDGLTILPP KRHSHRGRQI REFDLDAALA RRPALILMDE LAHSNAPGSR HPKRWQDIEE LLEAGIDVFT TVNVQHLESL NDVVSGVTGI QVRETVPDPF FDAADEVVLV DLPPDDLRQR LNEGKVYIAG QAERAIEHFF RKGNLIALRE LALRRTADRV DDQMRAWRAH PGEEKVWHTR DAILLCIGHN TGSEKLVRTA ARLASRLGSV WHAVYVETPT LHRLPEKQRR AILSALRLAQ ELGAETATLS DPAEEKAVVR YAREHNLGKI VMGRPASRRW WRRDAFADRL ARRAPDLDQV IVALEEPPAR ALAQTPDNRP FKEKWRGQIQ GCLVAVALCA ITTLIAMQWL VTFDAANLVM LYLLGVVVIA LLYGRWPSVV ATVINVASFD LFFIAPRGTL AVSDVQYLLT FAVMLTVGLV IGNLTAGVRY QARVARYREQ RTRHLYEMSK ALAVGRSEHD IAATSERFIA STFQARSQIL LPDANGKLLP LTHQQGMTPW DDAIARWSFD KGQPAGAGTD TLPGVPYQIL PLKSADKTYG LAIVEPGNLR QLMVPEQQRL LETFTLLVAN ALERLTLTAS EEQARLASER ESIRNALLAA LSHDLRTPLT VLFGQAEILT LDLASAGSPH ARQASEIRQH ILNTTRLVNN LLDMARIQSG GFNLKKEWLT LEEVVGSALQ MLEPGLLHPI TLSLPQQLTL IHVDGPLFER VLINLLENAV KYAGPQASIG IDAAVKDDRL QLDVWDNGPG IPAGQEQKIF DKFARGNKES AVPGVGLGLA ICHAIVEVHG GTLTAYNRPQ GGACFRVTLP QGKPPELDDF HEDM
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