Gene SNSL254_A0746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0746 
Symbol 
ID6486220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp754146 
End bp755552 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content51% 
IMG OID642736158 
Productouter membrane porin, OprD family 
Protein accessionYP_002039924 
Protein GI194442903 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACGT TTAGTGGCGA ACGTAGTACG CTGGCTCTGG CTATCGCCGG TATCACAGCA 
ATGTCGGGGT GGATCGTTGT TCCGCAGGCG CAAGCCTCCG GCTTTTTCGA CGACTCCACG
TTAACGGGCG GCATCTATTA TTGGCAGCGT GAACGCGATC GCAAAGATGT GACCGACGGC
GACAAATATA AAACTAACCT TTCTCATGCG ACCTGGAACG CTAACCTGGA TTTTCAGTCT
GGTTACGCTG CGGATATGTT CGGTCTGGAT ATCGCGGCGT TTACCGCGAT TGAAATGGCA
GAAAACGGCG ACAGCGGTCA TCCAAACGAA ATTGCTTTCT CGAAAAAGAA TAAAGGCTAC
GACGAAGACT ATTCCGGCGA TAAGAGCGGT ATCAGTCTTT ATAAAGCCGC CGCGAAATTT
AAATATGGCC CGGTCTGGGC GCGCGCCGGT TATATTCAGC CTACCGGTCA GACACTGTTA
GCGCCGCACT GGAGTTTTAT GCCGGGTACC TATCAGGGTG CGGAAGCCGG CGCCAGTTTT
GACTATGGCG ATGCGGGCGC GTTAAGTTTT TCCTACATGT GGACTAACGA ATATAAAGCG
CCGTGGCATA CCGAAATGGA TAAGTTTTAT CAGGCGGATA AAAAAACCAA TGTGGACTAT
CTCCACTCCA TCGGCGCGAA ATACGACTTC AAAAATGATC TGGTGCTGGA AGCGGCGTTT
GGTCAGTCCG AAGGCTATGT CGATCAATAT TTCGCAAAGG CCAGCTATAA ATTTGATTTA
GGCGGCAATC CGTTCACCAC CAGTTACCAG TTCTACGGCG CGCGCGACAA AGTAGACGAT
CGCAGCGTGA ATGATATTTA CGACGGTACG GCCTGGCTGC AGGCGTTGAC CTTCGGCTAC
AAAGTCGCGG AAGTGGTTGA CCTGCGTCTG GAAGGCACCT GGGTGAAAGC GGACGGTCAG
CAGGGCTATT TTCTGCAACG TATGACGCCA ACCTACGCCT CTTCAAACGG TCGTCTGGAT
ATCTGGTGGG ATAACCGCTC CGACTTTAAC GCTAACGGTG AAAAGGCGGT TTTCTTCGGC
GCGATGTATG ACCTGAAAAA CTGGAATCTG CCGGGCTGGG CTGTGGGTGC GTCTTACGTT
TACGCCTGGG ATGCTAAACC GGCAACTTGG CAAAGTAACC CGGATGCTTA CTACGACAAA
AACCGCACTA TTGAAGAGTC CTCATACAGT CTGGATGCGG TCTATACCCT GCAGGAGGGG
CGTGCCAAAG GCACCATGTT CAAACTGCAC TTCACCGAAT ATGACAACCA CTCCAATATT
CCAAGTTGGG GCGGTGGTTA CGGCAACATC TTCCAGGATG AGCGTGACGT GAAATTTATC
GTTATTGCGC CATTCACTAT TTTCTGA
 
Protein sequence
MRTFSGERST LALAIAGITA MSGWIVVPQA QASGFFDDST LTGGIYYWQR ERDRKDVTDG 
DKYKTNLSHA TWNANLDFQS GYAADMFGLD IAAFTAIEMA ENGDSGHPNE IAFSKKNKGY
DEDYSGDKSG ISLYKAAAKF KYGPVWARAG YIQPTGQTLL APHWSFMPGT YQGAEAGASF
DYGDAGALSF SYMWTNEYKA PWHTEMDKFY QADKKTNVDY LHSIGAKYDF KNDLVLEAAF
GQSEGYVDQY FAKASYKFDL GGNPFTTSYQ FYGARDKVDD RSVNDIYDGT AWLQALTFGY
KVAEVVDLRL EGTWVKADGQ QGYFLQRMTP TYASSNGRLD IWWDNRSDFN ANGEKAVFFG
AMYDLKNWNL PGWAVGASYV YAWDAKPATW QSNPDAYYDK NRTIEESSYS LDAVYTLQEG
RAKGTMFKLH FTEYDNHSNI PSWGGGYGNI FQDERDVKFI VIAPFTIF