Gene SNSL254_A0744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0744 
SymbolnagE 
ID6486412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp749655 
End bp751607 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content56% 
IMG OID642736156 
ProductPTS system N-acetyl glucosamine specific transporter subunits IIABC 
Protein accessionYP_002039922 
Protein GI194444609 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG2190] Phosphotransferase system IIA components 
TIGRFAM ID[TIGR00826] PTS system, glucose-like IIB component
[TIGR01998] PTS system, N-acetylglucosamine-specific IIBC component
[TIGR00830] PTS system, glucose subfamily, IIA component
[TIGR00852] PTS system, maltose and glucose-specific subfamily, IIC component 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.435763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.382563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTT TAGGTTTTTT CCAGCGGCTG GGTAGGGCGT TGCAGCTCCC TATCGCCGTG 
TTGCCGGTGG CAGCGTTGTT GCTGCGATTC GGCCAACCAG ATTTGCTGAA TATGCCGTTT
ATCGCGCAAG CGGGCGGGTC TATTTTCGAT AACCTGGCGT TGGTTTTCGC TATCGGCGTG
GCCTCCAGTT GGTCTAAAGA TAGCGCAGGC GCGGCAGCGC TGGCGGGAGC CGTGGGTTAC
TTCGTCATGA CCAAAGCGAT GGTGACGATT AACCCGGAAA TCAACATGGG CGTGCTGGCG
GGGATTATTA CCGGTCTGGT CGGCGGCGCG GTTTATAATC GTTGGTCTGG TATCAAACTG
CCTGATTTTC TCAGTTTCTT CGGTGGAAAA CGTTTTGTGC CGATCGCAAC GGGCTTTTTC
TGTCTGGTGC TGGCCGCTAT TTTCGGTTAC GTCTGGCCGC CGGTACAGCA TGGCATCCAT
GCGGGCGGTG AATGGATCGT TTCCGCAGGC GCGCTGGGTT CCGGTATCTT TGGCTTCATC
AACCGTCTGC TGATCCCAAC CGGTCTGCAT CAGGTACTGA ACACCATCGC CTGGTTCCAG
ATTGGTGAAT TCACCAATGC CGCAGGCACT GTATTCCACG GCGACATCAA CCGCTTCTAT
GCTGGCGACG GCACGGCGGG GATGTTTATG TCCGGCTTCT TCCCGATCAT GATGTTTGGT
CTGCCGGGCG CCGCTCTGGC GATGTATTTC GCCGCGCCGA AAGAACGTCG TCCGATGGTC
GGCGGTATGC TGCTGTCTGT CGCGATCACC GCGTTTCTGA CCGGCGTAAC CGAGCCGCTG
GAATTCCTGT TTATGTTCCT GGCGCCGCTG CTGTACCTCC TGCACGCCAT TTTGACTGGT
ATCAGCCTGT TCGTCGCGAC GTTGCTGGGT ATCCATGCGG GCTTCTCTTT CTCGGCAGGC
GCGATCGACT ATGTTCTGAT GTATAACCTG CCAGCGGCCA GCAATAACGT CTGGATGTTG
CTGGTGATGG GCGTTGTATT CTTTATCATC TACTTCCTGC TGTTCAGCGC GGTTATTCGT
ATGTTTAACC TGAAAACGCC GGGCCGCGAA GATAAAGTTG ATGAGATGGT AACGGAAGAA
GCCAATAGCA ACACCGAAGA AGGGTTAACG CAACTGGCGA CCAGCTATAT TGCTGCGGTT
GGCGGTACGG ACAACCTGAA AGCGATCGAT GCGTGTATTA CCCGTCTGCG CCTGACCGTG
AACGACTCTG CTCGCGTCAA CGATGCGGCC TGCAAACGCC TCGGCGCTTC CGGCGTGGTG
AAACTGAACA AACAGACCAT TCAGGTTATT GTCGGCGCGA AAGCGGAATC GATTGGCGAT
GAAATGAAGA AAGTGGTGGC GCGGGGGCCG GTCGCGGCAG CGTCTGCTGA TGCGGCTCAC
GTTGCGACAC CTGCTCCGGC GGCCAAACCC CAGGCGGTGC CGAATGCGGT GACTATCGCT
GAACTGGTCT CTCCGATTAC CGGTGAGGTA GTGGCGCTGG ATCAGGTACC GGATGAAGCG
TTTGCCAGCA AAGCGGTCGG CGACGGCGTG GCGGTGAAAC CCACCGATAA AACCGTGGTT
TCTCCGGCGG CGGGTACTAT CGTGAAAATC TTCAACACTA ACCACGCGTT CTGTCTGGAA
ACCGAAAAAG GCGCGGAGAT CGTTGTCCAT ATGGGTATCG ATACCGTCGC GCTGAACGGT
CAGGGCTTCA AGCGTCTGGT CGAAGAGGGT GCGGAAGTCA CGGCGGGTCA GCCGGTGCTG
GAACTGGATC TAGACTTCCT GAATGCCAAC GCGCGTTCCA TGATAAGCCC GGTTGTTTGC
AGCAACAGCG ATGACTTCAG CGCTCTGGTC ATCAAAGCGG ATGGTCACGT GGTAGCGGGT
AAAACGCCAC TGTACGAGAT CAAGAGCAAA TAA
 
Protein sequence
MNILGFFQRL GRALQLPIAV LPVAALLLRF GQPDLLNMPF IAQAGGSIFD NLALVFAIGV 
ASSWSKDSAG AAALAGAVGY FVMTKAMVTI NPEINMGVLA GIITGLVGGA VYNRWSGIKL
PDFLSFFGGK RFVPIATGFF CLVLAAIFGY VWPPVQHGIH AGGEWIVSAG ALGSGIFGFI
NRLLIPTGLH QVLNTIAWFQ IGEFTNAAGT VFHGDINRFY AGDGTAGMFM SGFFPIMMFG
LPGAALAMYF AAPKERRPMV GGMLLSVAIT AFLTGVTEPL EFLFMFLAPL LYLLHAILTG
ISLFVATLLG IHAGFSFSAG AIDYVLMYNL PAASNNVWML LVMGVVFFII YFLLFSAVIR
MFNLKTPGRE DKVDEMVTEE ANSNTEEGLT QLATSYIAAV GGTDNLKAID ACITRLRLTV
NDSARVNDAA CKRLGASGVV KLNKQTIQVI VGAKAESIGD EMKKVVARGP VAAASADAAH
VATPAPAAKP QAVPNAVTIA ELVSPITGEV VALDQVPDEA FASKAVGDGV AVKPTDKTVV
SPAAGTIVKI FNTNHAFCLE TEKGAEIVVH MGIDTVALNG QGFKRLVEEG AEVTAGQPVL
ELDLDFLNAN ARSMISPVVC SNSDDFSALV IKADGHVVAG KTPLYEIKSK