Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0730 |
Symbol | ubiF |
ID | 6486837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 740452 |
End bp | 741627 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642736142 |
Product | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase |
Protein accession | YP_002039915 |
Protein GI | 194446092 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.11675 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAATC AACCAACGGA AATTGCCATT GTCGGCGGGG GAATGGTCGG CGGCGCGCTG GCGCTGGGTC TGGCGCAGCA AGGGTTTACG GTGATGGTAA TAGAACATGC CGCGCCTGCG CCGTTTGTGG CTGACAGCCA GCCTGACGTG CGGATTTCGG CCATTAGCGC GGCATCCGTG GCGCTGCTCA AGGGGCTGGG CGTTTGGGAG GCGGTGCAGG GGATGCGTAG CCATCCTTAT CGGCGACTGG AGACCTGGGA GTGGGAAAAC GCCCATGTGG TGTTCGACGC CGCTGAACTC AAGCTGCCGC TGTTAGGCTA TATGGTAGAG AACAACGTCC TGCAACAGGC GCAGTGGCAG GCGCTGGAAG CGCACCCCGG CGTGACGCTG CGCGTTCCGG CCTCACTGGC GGCATTGCAC CGCCGCCACG ATGGTTATGC GCTGGAACTG GCCGACGGCG AATGGGTAAC GCCGAAGTTA GTGATTGGCG CCGACGGCGC GAATTCGCAG GTTCGGCAAC TGGCGGGAAT TGGCATTCAT GCCTGGCAAT ATGCACAGTC GTGTATGCTT ATCACCGTCA AGTGTGAAAA TGCGCCAGGC GACAGCACCT GGCAGCAGTT TACGCCAACG GGGCCGCGCG CCTTTTTGCC GCTGTTCGAC GATTGGGCGT CGCTGGTGTG GTATGACGCT CCGGCACGTA TTCGCCAGCT ACAGAATTTA TCGATGACGC AATTGCAGGT GGAAATTAAC CAGCACTTTC CGGCGCGTCT GGGGGCGGTG ATGCCTGTCG CGGCGGGCGC GTTTCCGCTA ACCCGTCGTC ACGCGTTGCA GTATGTACAA CCGGGGCTGG CGCTGGTAGG CGACGCGGCG CATACCATTC ATCCGCTGGC CGGGCAGGGC GTCAACCTGG GGTATCGGGA TGTTGATGCG TTGATTGATG TGCTGGCGAG TGCCCGTAGC TATGGTGAGT CCTGGGCCAG CCATTCGGTG TTGAAACGCT ATCAGACGCG GCGCATGGCA GATAATTTTA TGATGCAAAG TGGAATGGAT CTGTTTTATG CCGGGTTCAG CAATGAACTG CCGCCGCTGC GTATTTTACG CAATATGGGG CTGATGGCGG CGCAGCGCGC AGGCGTGCTA AAACGTCAGG CGCTGAAGTA TGCGTTGGGG TTGTAA
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Protein sequence | MTNQPTEIAI VGGGMVGGAL ALGLAQQGFT VMVIEHAAPA PFVADSQPDV RISAISAASV ALLKGLGVWE AVQGMRSHPY RRLETWEWEN AHVVFDAAEL KLPLLGYMVE NNVLQQAQWQ ALEAHPGVTL RVPASLAALH RRHDGYALEL ADGEWVTPKL VIGADGANSQ VRQLAGIGIH AWQYAQSCML ITVKCENAPG DSTWQQFTPT GPRAFLPLFD DWASLVWYDA PARIRQLQNL SMTQLQVEIN QHFPARLGAV MPVAAGAFPL TRRHALQYVQ PGLALVGDAA HTIHPLAGQG VNLGYRDVDA LIDVLASARS YGESWASHSV LKRYQTRRMA DNFMMQSGMD LFYAGFSNEL PPLRILRNMG LMAAQRAGVL KRQALKYALG L
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