Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0688 |
Symbol | lipA |
ID | 6484529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 699271 |
End bp | 700236 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642736101 |
Product | lipoyl synthase |
Protein accession | YP_002039874 |
Protein GI | 194443853 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0320] Lipoate synthase |
TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAC CCATTGTGAT GGAACGCGGT GTAAAATACC GCGATGCCGA TAAGATGGCT CTTATCCCGG TTAAAAATGT GGTCACAGAG CGCGACGCTC TACTACGTAA ACCGGAATGG ATGAAAATAA AACTTCCGGC GGATTCTACC CGTATCCAGG GCATCAAAGC CGCAATGCGC AAAAATGGCC TGCATTCTGT CTGCGAGGAA GCGTCTTGCC CAAACCTGGC TGAATGTTTC AACCACGGTA CCGCTACGTT TATGATCCTT GGGGCCATTT GCACTCGCCG CTGTCCGTTC TGTGATGTCG CCCATGGCCG CCCCGTTGCG CCGGATGCGG AAGAGCCGCA GAAACTGGCG CAAACGATCG CCGACATGGC GCTACGCTAT GTGGTCATCA CCTCTGTCGA CCGTGACGAT CTGCGTGACG GCGGCGCCCA GCATTTTGCT GACTGCATCA CCGCCATCCG TGCCAAAAGC CCGGAGATAA AAATAGAGAC GCTGGTGCCA GACTTCCGTG GACGTATGGA TCGCGCGCTG GATATCCTTA ACGCGACGCC GCCGGATGTG TTTAACCACA ACCTGGAAAA CGTGCCGCGT ATCTACCGCC AGGTTCGTCC GGGCGCCGAT TACAACTGGT CGCTGAAATT ACTGGAACGC TTCAAAGAAG CGCACCCGGA AATTCCGACA AAATCGGGTC TGATGGTGGG CTTAGGCGAA ACCAATGCGG AAATCATTGA GGTTATGCGC GACTTACGCC GTCACGGCGT TACCATGCTG ACGCTTGGTC AGTATCTACA GCCAAGCCGC CATCACCTGC CGGTACAGCG TTATGTCAGC CCGGAAGAGT TTGACGAGAT GAAAGCGGAA GCCCTGGCGA TGGGCTTTAC CCATGCCGCC TGTGGCCCCT TTGTACGTTC TTCGTACCAT GCTGATCTCC AGGCCAAAGG CATGGAAGTG AAATGA
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Protein sequence | MSKPIVMERG VKYRDADKMA LIPVKNVVTE RDALLRKPEW MKIKLPADST RIQGIKAAMR KNGLHSVCEE ASCPNLAECF NHGTATFMIL GAICTRRCPF CDVAHGRPVA PDAEEPQKLA QTIADMALRY VVITSVDRDD LRDGGAQHFA DCITAIRAKS PEIKIETLVP DFRGRMDRAL DILNATPPDV FNHNLENVPR IYRQVRPGAD YNWSLKLLER FKEAHPEIPT KSGLMVGLGE TNAEIIEVMR DLRRHGVTML TLGQYLQPSR HHLPVQRYVS PEEFDEMKAE ALAMGFTHAA CGPFVRSSYH ADLQAKGMEV K
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