Gene SNSL254_A0682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0682 
SymboldcuC 
ID6484297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp694800 
End bp696230 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content53% 
IMG OID642736095 
ProductC4-dicarboxylate transporter DcuC 
Protein accessionYP_002039868 
Protein GI194443774 
COG category[C] Energy production and conversion 
COG ID[COG3069] C4-dicarboxylate transporter 
TIGRFAM ID[TIGR00771] c4-dicarboxylate anaerobic carrier family protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTCTTA TTTTTACTCT GGGTGTCGAT AAGACAGGGG AAACAATGCT AACAGTTATA 
GAACTCCTTA TCGGAGTCGT CGTTATTGTG GGTGTAGCGC GCTACATCAT TAAGGGATAT
TCCGCCACTG GCGTTTTATT TGTCGGCGGT CTGGTTCTGC TTATTATCAG CGCGCTGATG
GGGCATAAGG TATTACCTGC CAGCGAAACC AGTACCGGCT ATACCGCAAC AGATATTGTT
GAATACATCA AAATTTTGCT TATGAGTCGC GGCGGCGATC TTGGCATGAT GATCATGATG
CTGTGCGGCT TTGCCGCCTA TATGACGCAT ATCGGCGCGA ATGATATGGT CGTGAAGCTG
GCGTCGAAAC CTTTACAGTA CATAAACTCG CCCTACCTGT TGATGATTGC TGCCTATTTT
GTCGCCTGCC TGATGTCGCT GGCCGTCTCT TCCGCGACGG GGCTTGGCGT ACTGCTCATG
GCTACTCTCT TCCCGGTGAT GGTCAACGTC GGCATTAGCC GCGGCGCGGC GGCGGCTATT
TGCGCCTCTC CGGCCGCCAT CATCCTCTCG CCAACGTCTG GCGATGTGGT TTTAGCCGCA
AAAGCGGCGG AGATGCCGTT AATCGATTTT GCGTTCAAAA CCACGCTGCC GATTTCCATC
GCCGCCATTA TCGGTATGGC GATTGCGCAC TTTTTCTGGC AACGCTATCT GGATAAAAAA
GAGAACATTT CACATGAGAT GCTGGACGTG GCGGAGATTA CCACCACAGC CCCGGCGTTT
TATGCCCTTT TACCGTTCAC GCCCATTATC GGCGTACTGA TTTTTGACGG TAAATGGGGG
CCGCAGTTGC ACATTATTAC CATTCTGGTG ATCTGTATGC TGCTGGCCGC CGTGCTGGAA
TTCGTGCGCG GCTTCAACAC GCAAAATGTG TTTTCCGGCC TGGAAGTGGC TTATCGCGGC
ATGGCGGATG CGTTTGCCGG CGTTGTGATG CTGCTGGTCG CGGCGGGCGT TTTCGCCCAG
GGGCTGAGCA CCATTGGCTT TATCCAAAGT CTGATCTCGA TTGCCACTTC TTTTGGCTCC
GCCAGCATTA TTCTGATGCT GGTCTTAGTG ATTTTAACCA TGCTGGCCGC GATGACCACC
GGTTCAGGCA ATGCGCCTTT TTACGCCTTT GTTGAGATGA TCCCTAAACT GGCGCACTCC
TCCGGCATCA ACCCAGCCTA TTTATCTATC CCAATGCTGC AAGCCTCAAA CCTGGGGCGC
ACGATTTCGC CAGTCTCCGG CGTCGTGGTC GCTGTCGCCG GGATGGCTAA AATATCACCG
TTTGAAGTGG TGAAACGCAC GTCCGTTCCG GTCATCGTCG GTCTGTTGAT CGTCATTATC
GCCACGGAAA TTATGGTGCC AGGCGCCTCT TCCGCCGTTA CTGGCGGCTG A
 
Protein sequence
MALIFTLGVD KTGETMLTVI ELLIGVVVIV GVARYIIKGY SATGVLFVGG LVLLIISALM 
GHKVLPASET STGYTATDIV EYIKILLMSR GGDLGMMIMM LCGFAAYMTH IGANDMVVKL
ASKPLQYINS PYLLMIAAYF VACLMSLAVS SATGLGVLLM ATLFPVMVNV GISRGAAAAI
CASPAAIILS PTSGDVVLAA KAAEMPLIDF AFKTTLPISI AAIIGMAIAH FFWQRYLDKK
ENISHEMLDV AEITTTAPAF YALLPFTPII GVLIFDGKWG PQLHIITILV ICMLLAAVLE
FVRGFNTQNV FSGLEVAYRG MADAFAGVVM LLVAAGVFAQ GLSTIGFIQS LISIATSFGS
ASIILMLVLV ILTMLAAMTT GSGNAPFYAF VEMIPKLAHS SGINPAYLSI PMLQASNLGR
TISPVSGVVV AVAGMAKISP FEVVKRTSVP VIVGLLIVII ATEIMVPGAS SAVTGG