Gene SNSL254_A0669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0669 
Symbol 
ID6485657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp682432 
End bp683670 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content54% 
IMG OID642736082 
Productalcohol dehydrogenase GroES-like domain protein 
Protein accessionYP_002039855 
Protein GI194444708 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.432264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAT TGACGTATCA CGGTCCACAT CACGTAAAGG TTGAAAACGT ACCCGATCCC 
GGCATTGAGC AGCCTGACGA TATCATTTTG CGTGTTACCG CCACCGCGAT TTGCGGATCT
GATTTGCATC TTTATCGCGG CAAGATCCCA CAGGTAAAAC ATGGCGATAT TTTCGGCCAT
GAATTTATGG GCGAAGTGGT GGAAACCGGA CATGATGTAA AGAATATTCA GAAAGGGGAC
CGGGTCGTTA TCCCGTTTGT CATTGCCTGT GGTGACTGCT TTTTCTGTCG GCTACAGCAA
TATTCAGCGT GTGAAAACAC TAACGACGGA CACGGCGCGG CGATGAATAA AAAACAGATC
CCGCCACCGG CGGCGCTGTT TGGGTATAGC CATCTGTATG GCGGCGTTCC CGGCGGACAG
GCCGAATATG TTCGCGTGCC AAAAGGTAAT GTCGGTCCAT TTAAGGTGCC GCCGCTGTTA
TCTGACGATA AGGCGCTGTT TCTTTCTGAT ATTTTGCCTA CCGCCTGGCA GGCGGCAAAA
AATGCCCAGA TTCAGCAAGG TTCCAGCGTG GCGGTTTTTG GCGCAGGGCC GGTAGGATTA
CTGACTATCG CCTGTGCGCG ACTGCTGGGC GCGGAGCAGA TCTTCGTCGT TGATCACCAC
GCCTGGCGCC TGCGTTTCGC CGAAGAACGT TACGGCGCGA TACCGATCAA CTTCGATGAT
GAGAACGATC CGGCGGAAAA AATCATCGAG CAGACGGCAG GACACCGCGG CGTGGACGCG
GTAATTGATG CCGTAGGCTT TGAAGCGAAA GGCAGCATGA CGGAGACGGT GCTGACGAAC
CTTAAACTGG AAGGCAGCAG CGGCAAAGCG CTGCGACAAT GTATCGCGGC GGTCAGACGC
GGCGGCGTGG TCAGCGTGCC CGGCGTGTAT GCCGGTTTTA TTCACGGCTT TTTATTCGGC
GACGCCTTTG ATAAGGGGCT AACTTTTAAA ATGGGTCAAA CCCATGTTCA CGCGTGGCTG
GGGGAATTAT TACCGCTTAT TGAAAAAGGG TTGCTGAAGC CGGAGGAGAT TGTCACGCAC
TATATGCCGT TTGAAGAGGC GGCGCGCGGC TACGAAATTT TCGAAAAACG CGAAGAAGAG
TGCCGGAAGG TTATCCTGGT GCCGGGAGCG ACGTCGGCAC AAGCGGCGCA GAAACAGGCG
ACGGGAGTAG TCAACCCGAT GCCAGGCGGC GTTGTCTGA
 
Protein sequence
MKALTYHGPH HVKVENVPDP GIEQPDDIIL RVTATAICGS DLHLYRGKIP QVKHGDIFGH 
EFMGEVVETG HDVKNIQKGD RVVIPFVIAC GDCFFCRLQQ YSACENTNDG HGAAMNKKQI
PPPAALFGYS HLYGGVPGGQ AEYVRVPKGN VGPFKVPPLL SDDKALFLSD ILPTAWQAAK
NAQIQQGSSV AVFGAGPVGL LTIACARLLG AEQIFVVDHH AWRLRFAEER YGAIPINFDD
ENDPAEKIIE QTAGHRGVDA VIDAVGFEAK GSMTETVLTN LKLEGSSGKA LRQCIAAVRR
GGVVSVPGVY AGFIHGFLFG DAFDKGLTFK MGQTHVHAWL GELLPLIEKG LLKPEEIVTH
YMPFEEAARG YEIFEKREEE CRKVILVPGA TSAQAAQKQA TGVVNPMPGG VV