Gene SNSL254_A0661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0661 
SymbolahpC 
ID6482659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp674857 
End bp675420 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content51% 
IMG OID642736076 
Productalkyl hydroperoxide reductase subunit C 
Protein accessionYP_002039849 
Protein GI194442213 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID[TIGR03137] peroxiredoxin 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTAA TTAACACCAA AATCAAACCT TTCAAAAACC AGGCGTTCAA AAATGGTGAA 
TTCATTGAAG TCACCGAGAA AGATACCGAA GGCCGCTGGA GCGTCTTCTT CTTCTACCCG
GCCGATTTTA CCTTTGTTTG CCCGACTGAA CTGGGTGACG TTGCCGACCA TTACGAAGAA
CTGCAGAAGC TGGGCGTAGA CGTTTATTCC GTCTCAACCG ATACTCACTT CACGCACAAA
GCATGGCACA GCAGCTCTGA AACTATCGCA AAAATCAAAT ATGCGATGAT CGGCGACCCG
ACTGGCGCCC TGACCCGTAA CTTCGACAAC ATGCGTGAAG ACGAAGGTCT GGCAGACCGT
GCGACCTTTG TTGTTGACCC GCAGGGTATC ATCCAGGCGA TCGAAGTTAC CGCTGAAGGT
ATCGGCCGTG ACGCGTCTGA CCTGCTGCGT AAAATTAAAG CAGCACAGTA CGTTGCCGCT
CACCCAGGCG AAGTATGCCC GGCGAAATGG AAAGAAGGCG AAGCGACTCT GGCTCCATCT
TTAGACCTGG TCGGTAAAAT CTAA
 
Protein sequence
MSLINTKIKP FKNQAFKNGE FIEVTEKDTE GRWSVFFFYP ADFTFVCPTE LGDVADHYEE 
LQKLGVDVYS VSTDTHFTHK AWHSSSETIA KIKYAMIGDP TGALTRNFDN MREDEGLADR
ATFVVDPQGI IQAIEVTAEG IGRDASDLLR KIKAAQYVAA HPGEVCPAKW KEGEATLAPS
LDLVGKI