Gene SNSL254_A0648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0648 
Symbol 
ID6486198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp660663 
End bp661838 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content58% 
IMG OID642736063 
Productisochorismate synthase EntC 
Protein accessionYP_002039836 
Protein GI194443319 
COG category[H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1169] Isochorismate synthase 
TIGRFAM ID[TIGR00543] isochorismate synthases 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.36468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATGT CACTGGCCGA GGACGCTCAG GAGACAATGG CAACGCTTGC TCCCGATCGC 
TTTTTCTTCA TGTCGCCGTA TCGCAGTTTT ACCACTTCCG GGTGCTTCGC CCGTTATACC
GAGCCTGCGG TTGCCGGAGA TTCGCCGGAT AGCCCTTTCC AGCAGAAATT GCGCCAGCAG
TTTGCCGAGG CCAAATCGCA GGGCATCGCC AACCCTATCC TGGTGGGGGC GATCCCCTTT
GATACTCGTC AGCCGTCGTC GCTATTTATC CCGATGGCGT GGCAGTCCTT TTCCCGCCAG
CAAAAGCAGC GCACGGCGCG TTATTTTACT GACCATCAGT CGCTGACGGT GACGGCGCGA
AAGGCGATTC CGGAGCAGGA TGCTTTTGAA GCGATGGTCG CACGCGCGGC TATGCTGACC
GCCACGCCAG ACGTCGATAA AGTGGTGCTT TCCCGGCTGA TAGATATCAC CACTGATGTG
GCGGTGGATA GCGGAGCATT GCTGGAGCGG CTGGTTGCGC AGAATCCAGT TAGTTACAAC
TTCCATGTGC CACTGGCGGA TGGCGGCGTT CTGCTGGGCG CCAGCCCCGA ATTGCTGCTA
CGCAAAGAGG GCGAGCGGTT TAGTTCGCTG CCGTTAGCAG GCTCGGCACG TCGACAGCCG
GATGACGTTC TGGATCGCGA GGCGGGAAAC CGACTGCTGG CTTCACAAAA AGATCGGCAT
GAACATGAGC TGGTGACGCA GGCGATGAAG CAGATCCTGC GCGATCGCAG CACGGAACTG
CAATTACCTT CCTCTCCGCA GTTGATCACC ACGCCGACGC TATGGCATCT CGGTACGCCG
TTTGAGGGCA AGGCCAACGC CGGAGAAAAC GCGCTGACGC TGGCCTGTCT GCTGCATCCA
ACGCCTGCGT TAAGCGGTTT CCCTCATCAG GTCGCGAAAA AGCTGATTGC TGAACTGGAA
CCGTTCGATC GTGAACTGTT TGGCGGCATT GTCGGCTGGT GCGATGCCGA AGGAAACGGC
GAGTGGGTAG TGACGATTCG TTGTGCGAAA TTGCACGGTA ATCAGGTGCG CCTGTTCGCT
GGCGCCGGGA TTGTCCCTGC CTCTTCGCCA GTCGGCGAGT GGCGGGAAAC CGGCGTCAAG
CTCTCTACGA TGTTGAACGT TTTTGGACTG CATTAA
 
Protein sequence
MDMSLAEDAQ ETMATLAPDR FFFMSPYRSF TTSGCFARYT EPAVAGDSPD SPFQQKLRQQ 
FAEAKSQGIA NPILVGAIPF DTRQPSSLFI PMAWQSFSRQ QKQRTARYFT DHQSLTVTAR
KAIPEQDAFE AMVARAAMLT ATPDVDKVVL SRLIDITTDV AVDSGALLER LVAQNPVSYN
FHVPLADGGV LLGASPELLL RKEGERFSSL PLAGSARRQP DDVLDREAGN RLLASQKDRH
EHELVTQAMK QILRDRSTEL QLPSSPQLIT TPTLWHLGTP FEGKANAGEN ALTLACLLHP
TPALSGFPHQ VAKKLIAELE PFDRELFGGI VGWCDAEGNG EWVVTIRCAK LHGNQVRLFA
GAGIVPASSP VGEWRETGVK LSTMLNVFGL H