Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0648 |
Symbol | |
ID | 6486198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 660663 |
End bp | 661838 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642736063 |
Product | isochorismate synthase EntC |
Protein accession | YP_002039836 |
Protein GI | 194443319 |
COG category | [H] Coenzyme transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1169] Isochorismate synthase |
TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.36468 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATGT CACTGGCCGA GGACGCTCAG GAGACAATGG CAACGCTTGC TCCCGATCGC TTTTTCTTCA TGTCGCCGTA TCGCAGTTTT ACCACTTCCG GGTGCTTCGC CCGTTATACC GAGCCTGCGG TTGCCGGAGA TTCGCCGGAT AGCCCTTTCC AGCAGAAATT GCGCCAGCAG TTTGCCGAGG CCAAATCGCA GGGCATCGCC AACCCTATCC TGGTGGGGGC GATCCCCTTT GATACTCGTC AGCCGTCGTC GCTATTTATC CCGATGGCGT GGCAGTCCTT TTCCCGCCAG CAAAAGCAGC GCACGGCGCG TTATTTTACT GACCATCAGT CGCTGACGGT GACGGCGCGA AAGGCGATTC CGGAGCAGGA TGCTTTTGAA GCGATGGTCG CACGCGCGGC TATGCTGACC GCCACGCCAG ACGTCGATAA AGTGGTGCTT TCCCGGCTGA TAGATATCAC CACTGATGTG GCGGTGGATA GCGGAGCATT GCTGGAGCGG CTGGTTGCGC AGAATCCAGT TAGTTACAAC TTCCATGTGC CACTGGCGGA TGGCGGCGTT CTGCTGGGCG CCAGCCCCGA ATTGCTGCTA CGCAAAGAGG GCGAGCGGTT TAGTTCGCTG CCGTTAGCAG GCTCGGCACG TCGACAGCCG GATGACGTTC TGGATCGCGA GGCGGGAAAC CGACTGCTGG CTTCACAAAA AGATCGGCAT GAACATGAGC TGGTGACGCA GGCGATGAAG CAGATCCTGC GCGATCGCAG CACGGAACTG CAATTACCTT CCTCTCCGCA GTTGATCACC ACGCCGACGC TATGGCATCT CGGTACGCCG TTTGAGGGCA AGGCCAACGC CGGAGAAAAC GCGCTGACGC TGGCCTGTCT GCTGCATCCA ACGCCTGCGT TAAGCGGTTT CCCTCATCAG GTCGCGAAAA AGCTGATTGC TGAACTGGAA CCGTTCGATC GTGAACTGTT TGGCGGCATT GTCGGCTGGT GCGATGCCGA AGGAAACGGC GAGTGGGTAG TGACGATTCG TTGTGCGAAA TTGCACGGTA ATCAGGTGCG CCTGTTCGCT GGCGCCGGGA TTGTCCCTGC CTCTTCGCCA GTCGGCGAGT GGCGGGAAAC CGGCGTCAAG CTCTCTACGA TGTTGAACGT TTTTGGACTG CATTAA
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Protein sequence | MDMSLAEDAQ ETMATLAPDR FFFMSPYRSF TTSGCFARYT EPAVAGDSPD SPFQQKLRQQ FAEAKSQGIA NPILVGAIPF DTRQPSSLFI PMAWQSFSRQ QKQRTARYFT DHQSLTVTAR KAIPEQDAFE AMVARAAMLT ATPDVDKVVL SRLIDITTDV AVDSGALLER LVAQNPVSYN FHVPLADGGV LLGASPELLL RKEGERFSSL PLAGSARRQP DDVLDREAGN RLLASQKDRH EHELVTQAMK QILRDRSTEL QLPSSPQLIT TPTLWHLGTP FEGKANAGEN ALTLACLLHP TPALSGFPHQ VAKKLIAELE PFDRELFGGI VGWCDAEGNG EWVVTIRCAK LHGNQVRLFA GAGIVPASSP VGEWRETGVK LSTMLNVFGL H
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