Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0588 |
Symbol | lpxH |
ID | 6483047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 602124 |
End bp | 602846 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642736005 |
Product | UDP-2,3-diacylglucosamine hydrolase |
Protein accession | YP_002039779 |
Protein GI | 194443705 |
COG category | [S] Function unknown |
COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01854] UDP-2,3-diacylglucosamine hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.02313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 0.128446 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGACAC TGTTTATTGC AGACTTGCAT CTGCAAACGG AAGAACCGGC GATCGTCGCC GGTTTTCTGC GTTTTTTAGC CGTAGAAGCC CGTCAGGCCG ACGCGCTGTA TATTCTTGGC GATCTCTTCG AGGCCTGGAT TGGCGACGAC GACCCCAACC CGCTACATCG TGAAATGGCC GTTGCCATTA AATCGCTGGT TGATTCCGGC GTCCCCTGCT TCTTTATTCA TGGTAATCGC GACTTCCTGA TTGGCAAACG CTTTGCCCGC GAAAGCGGCA TGATTCTACT GCCGCAGGAA AAAGTGCTCG ACCTGTATGG CCGCAATGTG TTGATTATGC ACGGCGATAC GCTCTGTACC GATGATGCCG GATATCAGGC GTTTCGCGCC AAAGTCCATA ATCCGTGGGT GCAACGACTG TTCCTTACCC TGCCGCTGTT TATCCGCCGC CGTATCGCCG CCAGAATGCG CGCCGGCAGT AAAGCCGCCA ACAGCAGCAA ATCGCTGGAT ATTATGGACG TCAATGCGCA GACCGTCGTC GCCGAAATGG AAAAACACCG CGTACAGTGG CTGATTCACG GTCATACCCA CCGCCCGGCG GTGCATGAAC TTTCCGCCAA CGACCAGCCC GCATTCCGCG TGGTGTTAGG CGCATGGCAT CATGAAGGTT CAATGGTAAA AGTCACGCCG GACAACGTTG AGTTAATCGC CTTCCCCCTG TAA
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Protein sequence | MATLFIADLH LQTEEPAIVA GFLRFLAVEA RQADALYILG DLFEAWIGDD DPNPLHREMA VAIKSLVDSG VPCFFIHGNR DFLIGKRFAR ESGMILLPQE KVLDLYGRNV LIMHGDTLCT DDAGYQAFRA KVHNPWVQRL FLTLPLFIRR RIAARMRAGS KAANSSKSLD IMDVNAQTVV AEMEKHRVQW LIHGHTHRPA VHELSANDQP AFRVVLGAWH HEGSMVKVTP DNVELIAFPL
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