| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0580 |
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| Symbol | allC |
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| ID | 6485291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 593119 |
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| End bp | 594354 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642735997 |
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| Product | allantoate amidohydrolase |
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| Protein accession | YP_002039771 |
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| Protein GI | 194443732 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family
[TIGR03176] allantoate amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.980604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 0.280695 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAGC ATTTTCGCCA CGCGATAGAA GAAACATTGC CCTGGCTCTC TTCCATTGGA
GCCGATCCTA CGGGTGGAAT GACGCGTTTA CTTTATTCGC CTGAGTGGCT GGAAACACAG
CAGCAATTTA AAAAGCGAAT GGCAGAAAGC GGTCTGGAAA CACGCTTTGA TGACGTCGGA
AATTTATATG GCCGCCTTTG CGGCACACAA TTTCCGGAGC AGGTGATTTT AAGCGGTTCG
CATATTGATA CGGTCGTCAA CGGCGGCAAT CTGGACGGAC AATTCGGCGC GCTTGCCGCC
TGGCTGGCGC TCGACTGGCT AAAAGCGACC TACGGCGCGC CGCTGCGCAC CGTCGAAGTA
GTGTCAATGG CAGAGGAAGA AGGCAGCCGT TTCCCTTACG TTTTTTGGGG CAGCAAGAAC
ATTTTTGGCC TGGCGAATCC TGAAGAGGTA CGCCATATCC AGGACGCCAA AGGCACAGGC
TTTGTCGACG CTATGCAGGC GTGCGGATTT ACCCTTCCCG CCGCGCCGCT CGCTGCGCGA
ACCGATATCC GCGCCTTTGT TGAATTGCAT ATTGAGCAAG GCTGCGTTCT GGAGAGCAAC
GGACAGTCGA TTGGCGTCGT CAACGCCATC GTCGGGCAAC GTCGCTACAC GGTGACGCTC
AACGGCGAGT CCAACCATGC AGGCACAACG CCAATGGGCT ATCGTCGCGA TACGGTGCAC
GCCTTCAGTC GTATTTGCAG TCAGTCCATT GAAAAAGCCA AACAGCATGG CGATCCCCTG
GTATTAACGT TCGGCAAAGT TGAGCCGCAG CCGAATACGG TCAATGTTGT CCCTGGAAAA
ACCACATTTA CAATCGATTG CCGGCATACG GACGCCGCGG TACTTCGCGA ATTTACCGAA
CAGTTGGAAA ACGATATGCG CGCCATCTGC GATGAAATGG ATATCAGCAT CGATATCGAT
TTGTGGATGG ACGAAGCGCC GGTGCCGATG AACGCCGAAC TGGTCGCGGC CCTCACCAGG
CTGTGTGAAA CCGAACAACT GAACTATCGC ATAATGCATA GCGGCGCAGG TCATGACGCG
CAAATTTTCG CGCCGCGCGT CCCTACCTGT ATGATTTTCG TCCCCAGCAT TAATGGTATC
AGCCATAACC CGGCGGAACG TACCAACATT AATGACCTTG CTGAAGGGGT CAAAACTCTG
GCATTAATGC TGCATCAACT TGCCTGGCAA AAATAA
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| Protein sequence | MIKHFRHAIE ETLPWLSSIG ADPTGGMTRL LYSPEWLETQ QQFKKRMAES GLETRFDDVG
NLYGRLCGTQ FPEQVILSGS HIDTVVNGGN LDGQFGALAA WLALDWLKAT YGAPLRTVEV
VSMAEEEGSR FPYVFWGSKN IFGLANPEEV RHIQDAKGTG FVDAMQACGF TLPAAPLAAR
TDIRAFVELH IEQGCVLESN GQSIGVVNAI VGQRRYTVTL NGESNHAGTT PMGYRRDTVH
AFSRICSQSI EKAKQHGDPL VLTFGKVEPQ PNTVNVVPGK TTFTIDCRHT DAAVLREFTE
QLENDMRAIC DEMDISIDID LWMDEAPVPM NAELVAALTR LCETEQLNYR IMHSGAGHDA
QIFAPRVPTC MIFVPSINGI SHNPAERTNI NDLAEGVKTL ALMLHQLAWQ K
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