Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0556 |
Symbol | |
ID | 6486580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 566883 |
End bp | 567560 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642735973 |
Product | putative ABC transporter ATP-binding protein YbbL |
Protein accession | YP_002039747 |
Protein GI | 194445905 |
COG category | [R] General function prediction only |
COG ID | [COG4619] ABC-type uncharacterized transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAAC GTAGCATGTT GCTTGAGTTA AAGCAGGTCG GTTACCGGAC TGCGACGACA AAAATAGTGA ATAACATCAG TTTTACGCTG CAACGCGGCG AATTTAAGTT AATTACCGGT CCTTCTGGCT GCGGAAAAAG TACGTTGTTG AAAATGGTGG CCTCGTTAAT AAGCCCTGAT ATCGGCGTGA TTCTTTTTGA GGGGCAGGAT ATTACTACTC TGAGTCCGGA AGCCTATCGC CAGCAGGTTT CTTATTGCGC TCAGACGCCA GCGCTATTTG GCGATACGGT TTACGATAAC CTGATTTTTC CCTGGCAAAT TCGCCATCAG CGCCCGCAGC CGACAGCCTT CGCAGACGAT CTGGCGCGTT TTGAACTGCC GGAGACGATT CTGCAAAAAC CGATTGCCGC GCTTTCCGGC GGGGAAAAAC AGCGTATTGC TCTAATTCGT AATCTACAGT TTCTGCCGAA AATACTGTTA CTCGACGAAA TAACCAGCGC GCTGGATGAA CATAACAAAC GGAATGTGAA TGATATTATT CATCGCTATG TTCGCGATAA GCAGGTCGCT GTCTTGTGGG TAACGCATGA TAAAGATGAA ATTCAACACG CGGATAAGGT GATAACGTTA ACGCCATCTG CCGGAGAGAT GCAGGAGGCG CGTTATGAAC GAGCATAA
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Protein sequence | MTERSMLLEL KQVGYRTATT KIVNNISFTL QRGEFKLITG PSGCGKSTLL KMVASLISPD IGVILFEGQD ITTLSPEAYR QQVSYCAQTP ALFGDTVYDN LIFPWQIRHQ RPQPTAFADD LARFELPETI LQKPIAALSG GEKQRIALIR NLQFLPKILL LDEITSALDE HNKRNVNDII HRYVRDKQVA VLWVTHDKDE IQHADKVITL TPSAGEMQEA RYERA
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