Gene SNSL254_A0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0556 
Symbol 
ID6486580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp566883 
End bp567560 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content48% 
IMG OID642735973 
Productputative ABC transporter ATP-binding protein YbbL 
Protein accessionYP_002039747 
Protein GI194445905 
COG category[R] General function prediction only 
COG ID[COG4619] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAC GTAGCATGTT GCTTGAGTTA AAGCAGGTCG GTTACCGGAC TGCGACGACA 
AAAATAGTGA ATAACATCAG TTTTACGCTG CAACGCGGCG AATTTAAGTT AATTACCGGT
CCTTCTGGCT GCGGAAAAAG TACGTTGTTG AAAATGGTGG CCTCGTTAAT AAGCCCTGAT
ATCGGCGTGA TTCTTTTTGA GGGGCAGGAT ATTACTACTC TGAGTCCGGA AGCCTATCGC
CAGCAGGTTT CTTATTGCGC TCAGACGCCA GCGCTATTTG GCGATACGGT TTACGATAAC
CTGATTTTTC CCTGGCAAAT TCGCCATCAG CGCCCGCAGC CGACAGCCTT CGCAGACGAT
CTGGCGCGTT TTGAACTGCC GGAGACGATT CTGCAAAAAC CGATTGCCGC GCTTTCCGGC
GGGGAAAAAC AGCGTATTGC TCTAATTCGT AATCTACAGT TTCTGCCGAA AATACTGTTA
CTCGACGAAA TAACCAGCGC GCTGGATGAA CATAACAAAC GGAATGTGAA TGATATTATT
CATCGCTATG TTCGCGATAA GCAGGTCGCT GTCTTGTGGG TAACGCATGA TAAAGATGAA
ATTCAACACG CGGATAAGGT GATAACGTTA ACGCCATCTG CCGGAGAGAT GCAGGAGGCG
CGTTATGAAC GAGCATAA
 
Protein sequence
MTERSMLLEL KQVGYRTATT KIVNNISFTL QRGEFKLITG PSGCGKSTLL KMVASLISPD 
IGVILFEGQD ITTLSPEAYR QQVSYCAQTP ALFGDTVYDN LIFPWQIRHQ RPQPTAFADD
LARFELPETI LQKPIAALSG GEKQRIALIR NLQFLPKILL LDEITSALDE HNKRNVNDII
HRYVRDKQVA VLWVTHDKDE IQHADKVITL TPSAGEMQEA RYERA