Gene SNSL254_A0534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0534 
SymboldnaX 
ID6483559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp545304 
End bp547232 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content59% 
IMG OID642735953 
ProductDNA polymerase III subunits gamma and tau 
Protein accessionYP_002039727 
Protein GI194442832 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.977578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones93 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTATC AGGTCTTAGC CAGAAAATGG CGCCCACAAA CCTTTGCTGA CGTCGTCGGC 
CAGGAACATG TGCTGACCGC ACTGGCGAAC GGCTTGTCGT TAGGGCGCAT TCATCACGCA
TATCTTTTTT CCGGCACGCG CGGCGTCGGT AAAACCTCTA TCGCCCGACT GCTGGCGAAG
GGGCTGAACT GCGAAACCGG TATTACCGCG ACGCCGTGCG GCGTTTGCGA TAACTGTCGG
GAAATTGAGC AGGGGCGTTT TGTCGATCTC ATTGAGATTG ACGCCGCATC GCGTACCAAA
GTCGAAGACA CCCGCGACCT GCTGGATAAC GTCCAGTACG CGCCTGCGCG CGGTCGCTTT
AAAGTCTATC TGATCGATGA AGTCCACATG CTGTCGCGCC ACAGCTTTAA TGCGCTACTT
AAAACGCTTG AAGAGCCGCC AGCGCATGTG AAATTTTTAC TGGCGACCAC CGATCCGCAG
AAGCTGCCGG TGACCATTTT GTCGCGCTGC CTACAGTTTC ATCTCAAAGC GCTGGATGTT
GAACAGATTC GCCATCAGCT TGAGCATATT CTCAATGAGG AACATATCGC TCACGAACCC
CGCGCGTTGC AGTTGTTATC GCGTGCGGCT GACGGCAGCC TGCGCGATGC ATTAAGTCTG
ACTGACCAGG CGATCGCCAG CGGCGACGGG CAGGTTTCGA CGCAGGCGGT AAGCGCCATG
CTCGGTACGC TGGACGACGA CCAGGCTTTG TCATTAGTCG AGGCGGTGGT TGACGCTAAC
GGCGAACGCG TCATGTCGCT TATCAACGAG GCGGCGGCGC GCGGTATTGA ATGGGAAGCG
CTGCTGGTCG AAATGCTTAG CCTGCTGCAC CGTATTGCGA TGGTGCAACT TTCGGTTGCC
GCGTTAGGCA GCGATATGGC GGCTATCGAG CAACGGATGC GCGAACTTGC CCGGACGGTG
CCTCCCGGCG ATCTTCAGCT CTATTATCAG ACGTTGTTGA TTGGCCGCAA AGAATTGCCC
TGGGCGCCGG ACCGGCGGAT GGGCGTTGAA ATGACGTTAC TGCGTGCGCT GGCGTTTCAC
CCGCGTATGC CCTTGCCGGA GCCTGAAACG CCGCGGCAGT CTTTTGCGCC CGTGGCCCCA
ACGGCGGTAA TGACGCCGCC GCAGGTGCAG CAGCCGTCGG CGCCCGCGCC GCAGACATCG
CCAGCGCCGC TGCCGGCGTC TACCAGTCAG GTGCTGGCGG CGCGCAATCA GCTACAGCGC
GCGCAGGGAG TAACCAAAAC AAAAAAGAGT GAACCGGCAG CCGCATCCCG CGCGCGGCCG
GTGAATAACT CTGCGCTGGA GCGGCTGGCC TCGGTTTCGG AGCGCGTACA GGCGCGCCCG
GCGCCGTCTG CGCTGGAAAC GGCGCCAGTA AAGAAAGAGG CTTATCGCTG GAAGGCCACC
ACGCCGGTAG TACAAACCAA AGAAGTGGTG GCTACGCCAA AAGCGCTTAA GAAAGCTCTG
GAGCATGAAA AAACGCCGGA GCTGGCGGCT AAACTGGCGG CGGAAGCGAT TGAGCGCGAT
CCGTGGGCGG CGCAGGTAAG CCAGCTTTCT TTGCCTAAGC TGGTGGAGCA GGTGGCGCTC
AATGCCTGGA AGGAGCAGAA CGGCAACGCG GTTTGTCTGC ATCTGCGCTC GACGCAGCGG
CACCTCAATT CCAGCGGCGC GCAGCAAAAG CTGGCGCAAG CGCTCAGCGA TCTGACGGGA
ACGACGGTTG AACTGACCAT CGTTGAAGAT GATAATCCCG CGGTGCGTAC GCCGCTGGAA
TGGCGTCAGG CCATTTATGA AGAGAAACTC GCGCAAGCGC GTGAGTCAAT TATTGCGGAT
AATAACATTC AGACGCTGCG TCGATTCTTC GACGCCGAGC TGGATGAAGA GAGTATCCGC
CCCATTTGA
 
Protein sequence
MSYQVLARKW RPQTFADVVG QEHVLTALAN GLSLGRIHHA YLFSGTRGVG KTSIARLLAK 
GLNCETGITA TPCGVCDNCR EIEQGRFVDL IEIDAASRTK VEDTRDLLDN VQYAPARGRF
KVYLIDEVHM LSRHSFNALL KTLEEPPAHV KFLLATTDPQ KLPVTILSRC LQFHLKALDV
EQIRHQLEHI LNEEHIAHEP RALQLLSRAA DGSLRDALSL TDQAIASGDG QVSTQAVSAM
LGTLDDDQAL SLVEAVVDAN GERVMSLINE AAARGIEWEA LLVEMLSLLH RIAMVQLSVA
ALGSDMAAIE QRMRELARTV PPGDLQLYYQ TLLIGRKELP WAPDRRMGVE MTLLRALAFH
PRMPLPEPET PRQSFAPVAP TAVMTPPQVQ QPSAPAPQTS PAPLPASTSQ VLAARNQLQR
AQGVTKTKKS EPAAASRARP VNNSALERLA SVSERVQARP APSALETAPV KKEAYRWKAT
TPVVQTKEVV ATPKALKKAL EHEKTPELAA KLAAEAIERD PWAAQVSQLS LPKLVEQVAL
NAWKEQNGNA VCLHLRSTQR HLNSSGAQQK LAQALSDLTG TTVELTIVED DNPAVRTPLE
WRQAIYEEKL AQARESIIAD NNIQTLRRFF DAELDEESIR PI