Gene SNSL254_A0510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0510 
Symbol 
ID6482435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp522927 
End bp524708 
Gene Length1782 bp 
Protein Length593 aa 
Translation table11 
GC content58% 
IMG OID642735930 
Productputative multidrug transporter membraneATP-binding components 
Protein accessionYP_002039704 
Protein GI194446213 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.991791 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAGTT TTGGACAGCT ATGGCCGACG CTGAAACGGT TGCTGGCGTA TGGCTCGCCA 
TGGCGAAAAC CGCTCTCTGT CGCGGTGATG ATGCTGTGGA TTGCGGCGGC GGCGGAGGTT
AGCGGTCCGC TGCTGATCAG CTATTTCATT GATAACATGG TGGCCCGCCA CCATTTACCG
TTGGGCAAGG TCGCGGGGCT GGCGGCCGCC TATGTGGGGC TACAGTTTCT GGCGGCGGGT
CTGCATTACG CCCAGTCTTT ATTATTTAAC CGGGCGGCCG TTGGCGTGGT TCAGTCCTTG
CGCACGGACG TCATGGATGC CGCCTTGCGC CAGCCGCTAA GCGCCTTCGA CACGCAGCCT
GTCGGACAAT TAATTTCACG CGTGACCAAC GATACGGAAG TCATCCGCGA TCTGTACGTC
ACGGTCGTCG CGACGGTATT ACGTAGCGCG GCGTTGATCG GCGCCATGCT GGTCGCCATG
TTCAGCCTTG ACTGGCGGAT GGCGCTGGTG GCGATTTTGA TTTTTCCGGC GGTATTGACC
GTGATGATCA TTTATCAGCG CTACAGCACG CCGATTGTAC GCCGCGTGCG GGCATACCTG
GCGGATATTA ACGACGGCTT TAACGAAATC ATCAATGGGA TGAGCGTAAT CCAGCAGTTT
CGCCAGCAGG CGCGCTTCGG CGAACGCATG GGCGAGGCCA GCCGCTCGCA CTACATGGCG
CGGATGCAGA CGCTGCGCTT GGATGGCTTT TTATTGCGTC CGCTGCTTAG CCTCTTTTCC
GCGCTCATTT TATGCGGTTT GTTGATGCTT TTCAGCTTTA CGTCTGCCGG CACGATTGAG
GTCGGGGTGC TGTATGCGTT CATTAGCTAT TTGTCACGTC TGAACGAGCC GCTCATTGAA
CTGACCACCC AGCAATCCAT GCTACAGCAG GCGGTTGTGG CGGGAGAGCG TGTTTTTGAA
CTGATGGATC GCCCGCGCCA GCGCTATGGC AGCGACGACA GGCCGTTACA AAGCGGGGCG
ATTGATATTG ATCATCTGTC GTTTGCTTAC CGCGACGATA ATCTTGTTTT ACAGGACATT
ACGCTATCAG TACCGTCCCG TAGCTTTGTG GCGCTGGTGG GGCACACCGG CAGCGGGAAG
AGTACGCTCG CCAGCTTATT AATGGGGTAT TACCCCCTGA CACAAGGCGA AATTCGGCTG
GATGGGCGAG AAATCGCCTC TCTTAATCAT CGCGTTTTAC GCCAGGGCGT GGCGATGGTT
CAACAGGACC CGGTAGTGAT GGCGGATACC TTTCTGGCTA ATGTGACGCT GGGGCGCGAT
GTCTCCGAGG CGCAGGTGTG GCAGGCGCTG GAAACGGTAC AACTGGCAGA TCTGGCGCGC
GGCTTGAGCG ACGGGCTGCA TACGCATCTC GGCGAGCAGG GAAATACGCT GTCCGTCGGG
CAAAAACAGC TATTGGCGCT GGCGCGCGTG CTGGTTGACG CCCCGCAAAT ATTAATTCTT
GATGAAGCGA CGGCCAGCAT CGATTCCGGC ACTGAGCAGG CGATACAGCA GGCGCTGGCG
GCGATTCGCG AGCGCACCAC GCTGGTGGTT ATTGCCCATC GTCTATCGAC AATCGTGGAG
GCGGATACCA TTCTGGTTCT CCATCGCGGC CAGGCGGTGG AGCGCGGGAC GCATCAACAA
TTGCTGGCGG CGCAAGGGCG CTACTGGCAA ATGTATCAAT TACAGTTAGT TGGCGAGGAG
TTAGCCGCCA GCGTACACGA AGAACCCGGC CCTGCGGCAT AA
 
Protein sequence
MRSFGQLWPT LKRLLAYGSP WRKPLSVAVM MLWIAAAAEV SGPLLISYFI DNMVARHHLP 
LGKVAGLAAA YVGLQFLAAG LHYAQSLLFN RAAVGVVQSL RTDVMDAALR QPLSAFDTQP
VGQLISRVTN DTEVIRDLYV TVVATVLRSA ALIGAMLVAM FSLDWRMALV AILIFPAVLT
VMIIYQRYST PIVRRVRAYL ADINDGFNEI INGMSVIQQF RQQARFGERM GEASRSHYMA
RMQTLRLDGF LLRPLLSLFS ALILCGLLML FSFTSAGTIE VGVLYAFISY LSRLNEPLIE
LTTQQSMLQQ AVVAGERVFE LMDRPRQRYG SDDRPLQSGA IDIDHLSFAY RDDNLVLQDI
TLSVPSRSFV ALVGHTGSGK STLASLLMGY YPLTQGEIRL DGREIASLNH RVLRQGVAMV
QQDPVVMADT FLANVTLGRD VSEAQVWQAL ETVQLADLAR GLSDGLHTHL GEQGNTLSVG
QKQLLALARV LVDAPQILIL DEATASIDSG TEQAIQQALA AIRERTTLVV IAHRLSTIVE
ADTILVLHRG QAVERGTHQQ LLAAQGRYWQ MYQLQLVGEE LAASVHEEPG PAA