| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0505 |
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| Symbol | |
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| ID | 6485559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 516826 |
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| End bp | 518526 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642735925 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_002039699 |
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| Protein GI | 194444886 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4533] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.679744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.144898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCTAC TGAATCGGCT TAATCAATAT CAACGCCTCT GGCAGCCTTC CGCCGGGGAA
ACGCAACATG TCACCGTTAG CGAACTGGCC GAACGCTGTT TTTGTAGCGA GCGCCATCTG
CGAACGCTGC TGCGTCAGGC CCAGCAGGCA GGTTGGCTAA GATGGGAGGC GCAGTCCGGG
CGCGGGAAAC GTGGACGGCT CCAGTTTCTG GTCACGCCGG AATCGCTCCG CACCGCCATG
ATGGAACAGG CGCTGGAAAA AGGGCAGCAG CTCAACGTAC TGGAACTGGC GCAGCTGGCG
CCGGGCGAGT TACGGGCGAT GCTTCAGCCT TTTATGGGCG GCCAATGGCA AAACGATACG
CCGACATTGC GTATTCCCTA CTATCGTCCG CTTGATCCGC TGCAGCCGGG TTTCCTGCCA
GGCCGCGCGG AACAGCATCT CGCAGGGCAA GTTTTTTCCG GGTTAACGCG CTTCGACCGC
GACAGTCAAT ATCCTTGCGG GGATTTGGCG CATCACTGGG AGATTTCCGC CGACGGTTTA
CGCTGGGATT TTTATATTCG CTCCACGCTG CACTGGCATA ATGGCGATAC GGTGGACACC
ACGCAGCTAC ACGAACGCCT GGAAAGGCTG CTTACCCTAC CGGCGCTAAG CAAATTGTTT
ATTAGCGTCG CACGGATCGA AGTAACGCAT CCTCAGTGCC TGACCTTTCT CCTTCACCGA
CCTGATTACT GGCTGGCGCA TCGTCTGGCG AGCTATTGTA GCGGTCTGGC GCATCCTGAC
CTGCCGCTTA TCGGCACAGG TCCTTTTCGC CTGGCGTTGT TCACGCCGGA ACTGGTGCGT
CTGGAAAGTC ATGACCATTA TCACCTCAGC CATCCGCTGC TGAAAGCGAT TGAATTCTGG
ATCACCCCGC AACTGTTTGC CCAGGATCTG GGCACCAGTT GCCGCCATCC GGTGCAGATT
GCCATCGGCA AACCGGAAGA GCTGGCGACG CTGAGTCAGG TAAGTAGTGG TATCAGTCTT
GGCTTTTGTT ATTTAACCCT CAAAAAGGGC TCACGGCTCA ACGTACAGCA GGCGCGGCGT
CTGATACATA TTATCCATCA TACTTCGCTG CTGAAAACCT TACCGGTAGA TGAGAACTTG
ATTATGCCAA GTCAGGGGCT GCTACCCGGC TGGACAATCC CGCAATGGCA GGACGTTGAT
GAAACGCCAT TGCCGAAAAA ACTTACCCTG GCGTATCACC TTCCCGTAGA GCTGCATACG
ATGGCGGAAC AGCTTCGACA TTACCTGGCG ACGCTCGGCT GTGAGTTAAC GTTGATTTTT
CATAATGCCA AAAACTGGGA TAACTGCCCT GCGTTGGCGC AAGCGGATCT GATGATGGGC
GACAGGCTGA TCGGCGAAGC GCCGGAATAT ACGCTGGAGC AGTGGCTACG TTGCGATCAG
ATCTGGCCGC ATGTCCTGGA CGCGCCTGCG TTTTCCCATC TGCAGGCTAC GCTTGACGCT
CTGCAAATTC AGCCCAATGA AAAAGATCGC CGCGCCACGC TACAACAAGT TTTTGCTAAC
CTGATGGATG ACGCCACACT TACGCCGCTG TTTAATTATC ACTATCGCAT CAGCGCCCCA
CCGGGCGTTA ACGGCGTTCG GCTCACCCCT CGCGGCTGGT TTGAATTTAG CGAAGCCTGG
CTTCCGCCGC CTTCGCCGTG A
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| Protein sequence | MRLLNRLNQY QRLWQPSAGE TQHVTVSELA ERCFCSERHL RTLLRQAQQA GWLRWEAQSG
RGKRGRLQFL VTPESLRTAM MEQALEKGQQ LNVLELAQLA PGELRAMLQP FMGGQWQNDT
PTLRIPYYRP LDPLQPGFLP GRAEQHLAGQ VFSGLTRFDR DSQYPCGDLA HHWEISADGL
RWDFYIRSTL HWHNGDTVDT TQLHERLERL LTLPALSKLF ISVARIEVTH PQCLTFLLHR
PDYWLAHRLA SYCSGLAHPD LPLIGTGPFR LALFTPELVR LESHDHYHLS HPLLKAIEFW
ITPQLFAQDL GTSCRHPVQI AIGKPEELAT LSQVSSGISL GFCYLTLKKG SRLNVQQARR
LIHIIHHTSL LKTLPVDENL IMPSQGLLPG WTIPQWQDVD ETPLPKKLTL AYHLPVELHT
MAEQLRHYLA TLGCELTLIF HNAKNWDNCP ALAQADLMMG DRLIGEAPEY TLEQWLRCDQ
IWPHVLDAPA FSHLQATLDA LQIQPNEKDR RATLQQVFAN LMDDATLTPL FNYHYRISAP
PGVNGVRLTP RGWFEFSEAW LPPPSP
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