Gene SNSL254_A0502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0502 
Symbol 
ID6482577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp515084 
End bp515458 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content52% 
IMG OID642735922 
Productcompetence protein ComEA 
Protein accessionYP_002039696 
Protein GI194446699 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.160916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACG GAATTAAAGC ACTGCTTATT ACACTTTCTT TAACCTGCGC GGGCATGGCC 
CATAGCGCGC TGGCGGCGAC GCCTGTCGCA AAAAATGCAG CGGTGGAAAC AAAAGCGGAT
ACGCCTTCTT CATCCTCCGC CAAAGCGGCA TTACCTGCTA AAGCCAGCGA TGATGAAGGT
ACCAGGGTGA GCATTAATAC CGCGTCTGCG GAGGATCTGG CGCGGGTGAT GAACGGCGTT
GGGCTGAAAA AAGCGCAGGC TATTGTGAGC TATCGGGAGG AGTATGGTCC TTTTAAAACG
GTGGATGATT TAAAGCAGGT GCCGGGAATG GGAAGCGCGC TGGTGGAGCG TAATCTGGCA
GTTTTAACAT TGTAA
 
Protein sequence
MKHGIKALLI TLSLTCAGMA HSALAATPVA KNAAVETKAD TPSSSSAKAA LPAKASDDEG 
TRVSINTASA EDLARVMNGV GLKKAQAIVS YREEYGPFKT VDDLKQVPGM GSALVERNLA
VLTL