| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0477 |
|---|
| Symbol | |
|---|
| ID | 6483948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 487756 |
|---|
| End bp | 488475 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642735898 |
|---|
| Product | transcriptional regulator protein |
|---|
| Protein accession | YP_002039672 |
|---|
| Protein GI | 194445645 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR03337] transcriptional regulator protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.489197 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 0.580276 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCTA TCCCGGGCGA TATCCCGCAG TACCTGTTGA TCAAGGCACA GCTTCAGGCA
CGTATTCAGA GCGGTGCGTT GAAAAGCGGT GATAAACTGC CGTCTGAACG CGAACTGTGC
GCGATCTTCA ACACCACGCG CATTACTATT CGCGAAAGTC TGGCACAGCT GGAGTCCAGT
GGGCTTATCT GGCGCGCCGA TCGTCGCGGT TGGTTCGTTA CGCCGGAACG CCTGTGGCTG
GATCCGACCC AGAACACCAA CTTCCATAAG CTTTGCCGCG AGCAGGGGCG GGAGCCAAAA
ACCGCGCTAC TGAGCGGCGT GTTAACCACC GTGCCTGTCG AGGTCATGGA GCCCCTCCAG
CTCCAGCCGT TTGATCAAAT CTATCTGCTG ACCCGTCTGC GTTACGCCGA TGGCCGCGCC
GTGTGCTACT GCGAAAACCA TTGTTTGCCC GCCCGCGTGC CTGAGCTGCT GCAGTACGAT
CTCAACGGCA GCCTGACCGA GGTATACGAG TCGCACTACA ACCTCGTCTA TACCAGCATG
CATCTGTCGT TCTACCCCAC CGCCATGCCT GCGCAGGCCG CACAGGCGCT GGGCGTTATG
GAAGGGCGCC CGGCGCTGTT GCTGCGCCGT CTGAACTACG ATCAACACGG GCGAGTGCTG
GATCTGGATA TCGAATACTG GCGTCACGAC AGCCTGCGCA TTGAGGTAGA TACCCACTAG
|
|---|
| Protein sequence | MKSIPGDIPQ YLLIKAQLQA RIQSGALKSG DKLPSERELC AIFNTTRITI RESLAQLESS
GLIWRADRRG WFVTPERLWL DPTQNTNFHK LCREQGREPK TALLSGVLTT VPVEVMEPLQ
LQPFDQIYLL TRLRYADGRA VCYCENHCLP ARVPELLQYD LNGSLTEVYE SHYNLVYTSM
HLSFYPTAMP AQAAQALGVM EGRPALLLRR LNYDQHGRVL DLDIEYWRHD SLRIEVDTH
|
|---|
| |