| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0454 |
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| Symbol | secF |
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| ID | 6485429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 468592 |
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| End bp | 469563 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642735876 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_002039650 |
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| Protein GI | 194443856 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 102 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCACAGG AATACACTGT TGAACAACTA AACCACGGCC GTAAAGTCTA TGACTTTATG
CGCTGGGACT TCTGGGCATT CGGCATCTCC GGGCTGTTGC TGATCGCGGC CATTGTCATT
ATGGGCGTAC GCGGGTTTAA CTGGGGGCTG GATTTCACCG GTGGTACGGT AATTGAAATC
ACGCTGGAAA AACCGGCTGA AATGGACGTG ATGCGCGAAG CGCTGCAAAA AGCGGGCTAT
GAAGAGCCGC AGTTGCAGAA CTTTGGCAGC AGTCACGACA TTATGGTGCG TATGCCGCCA
ACCGAAGGTG AAACCGGCGG TCAGGTACTG GGTAGCAAAG TGGTGACGAT CATTAATGAA
GCCACCAACC AGAACGCGGC CGTGAAGCGT ATTGAATTCG TGGGGCCAAG CGTGGGCGCC
GATCTGGCGC AAACCGGCGC TATGGCGCTG CTGGTGGCGT TGATCTCTAT CCTCGTTTAT
GTCGGTTTCC GCTTTGAGTG GCGACTGGCG GCAGGGGTGG TCATCGCGCT GGCGCACGAC
GTGATCATTA CGCTGGGGAT ACTGTCGCTT TTCCATATCG AGATTGACCT GACCATTGTG
GCATCGTTGA TGTCGGTGAT CGGTTACTCG CTGAACGACA GTATCGTGGT CTCCGACCGT
ATTCGTGAAA ACTTCCGCAA AATCCGTCGC GGGACGCCTT ACGAAATCTT TAACGTGTCG
CTGACCCAGA CGCTACACCG TACGTTGATT ACCTCCGGTA CGACGTTAGT GGTAATTTTG
ATGCTGTACC TCTTCGGCGG TCCGGTACTG GAAGGCTTCT CGCTGACGAT GCTGATCGGT
GTCTCTATTG GTACGGCATC TTCTATCTAT GTCGCATCGG CGCTGGCGCT GAAACTCGGT
ATGAAGCGCG AGCATATGCT GCAGCAGAAA GTCGAAAAAG AAGGGGCGGA TCAGCCGTCC
ATTCTGCCGT AA
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| Protein sequence | MAQEYTVEQL NHGRKVYDFM RWDFWAFGIS GLLLIAAIVI MGVRGFNWGL DFTGGTVIEI
TLEKPAEMDV MREALQKAGY EEPQLQNFGS SHDIMVRMPP TEGETGGQVL GSKVVTIINE
ATNQNAAVKR IEFVGPSVGA DLAQTGAMAL LVALISILVY VGFRFEWRLA AGVVIALAHD
VIITLGILSL FHIEIDLTIV ASLMSVIGYS LNDSIVVSDR IRENFRKIRR GTPYEIFNVS
LTQTLHRTLI TSGTTLVVIL MLYLFGGPVL EGFSLTMLIG VSIGTASSIY VASALALKLG
MKREHMLQQK VEKEGADQPS ILP
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