Gene SNSL254_A0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0452 
SymbolyajC 
ID6484587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp466374 
End bp466706 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content52% 
IMG OID642735874 
Productpreprotein translocase subunit YajC 
Protein accessionYP_002039648 
Protein GI194444866 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.654019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones105 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTT TTATTTCTGA TGCGGTAGCG GCAACAGGTG CTCCAGCGCA GGGCAGCCCG 
ATGTCTCTGA TTTTAATGCT GGTGGTGTTT GGTCTGATTT TCTATTTCAT GATCCTGCGC
CCGCAGCAGA AGCGCACCAA AGAGCACAAA AAGCTGATGG ACTCCATTGC GAAAGGTGAT
GAAGTTCTGA CGAATGGCGG TCTGGTCGGT CGAGTGACCA AAGTAGCGGA AGCCGGCTAC
ATTGCCATCG CGCTGAATGA CACCACGGAA GTGGTTATCA AACGTGACTT CGTAGCTGCC
GTTCTGCCGA AAGGCACCAT GAAGGCGCTG TAA
 
Protein sequence
MSFFISDAVA ATGAPAQGSP MSLILMLVVF GLIFYFMILR PQQKRTKEHK KLMDSIAKGD 
EVLTNGGLVG RVTKVAEAGY IAIALNDTTE VVIKRDFVAA VLPKGTMKAL