Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0446 |
Symbol | |
ID | 6484306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 460586 |
End bp | 462403 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642735868 |
Product | maltodextrin glucosidase |
Protein accession | YP_002039642 |
Protein GI | 194444664 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.565903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 103 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAATG CCTGGCACTT ACCGGTTGCC CCATTTGTGA AGCAACATAA CGATAAATTA ACCATTACGC TGTGGCTGAG CGGAGAAAAT CCGCCGTCTC GCGTGACGTT GCGCTCAGAA TTCGATAATG AAGAAATCTC ACTGGCGATG CGCAAACAGC GCCGCCAGCC GCAGCCGGGC GTGACGGCGT GGCGAGCGAC GCTCAATATC GCGTTAGGGC AACCCCGTCG CCGTTACAGC TTTAAATTGC TTTGGCACGA CCGCCAGCTT TGGTTTACGC CGCAGGGATT TAACCGCTTC CCACCGGCGC GTCTGGAACA ATTTGCCGTT GATGTTCCGG ACAGCGGCCC GCAGTGGGTC GCCGATCAAA TTTTTTATCA GATCTTCCCG GATCGTTTTG CCCGCAGCCA GTCTCGTGAA GCTGGGCAGG ATAAGGTGTA TTACCACCAT GCTGCCGGTC ACGACATCGT GCGTAAAGAG TGGGATGAAC CGCTCACCCC CCAGGCGGGC GGTTCCACCT TTTACGGCGG CTGTCTGAAT GGCATTTGTG AGAAGCTGCC GTATCTGAAA AAACTGGGCG TCACAGCGCT ATATCTGAAT CCGGTATTTA CCGCGCCGAG CGTCCATAAG TACGACACGG AAGATTATCG TCATGTCGAT CCGCAATTTG GCGGCGATCG GGCGCTGCTA CGCCTGCGGC GTGAAACCCA GGCGCAGGGC ATGAGGCTGG TGCTGGATGG CGTGTTTAAT CATAGTGGCG ACTCGCATGC GTGGTTTGAC AGGCATAACC GCAGCACTGG CGGCGCGTGC CATCACCCGG ACTCGCCGTG GCGCGACTGG TACTCCTTTT CACCACAAGG CGTGGCGCTG GACTGGCTGG GTTATCCGAG CCTGCCGAAA CTCGATTATC AATCAGAAAC GCTGGTGGAT GAGATCTATC GCGGTGAGGA CAGTATCGTT CGTCACTGGC TAAAGGCACC GTGGAATATG GACGGCTGGC GGCTGGATGT CGTACATATG CTGGGCGAGG CGGGCGGGGC GCGCCACAAT TTGCAGCACG TCGCCGGCAT TACCCGGGCG GCAAAAGAGG CGCAGCCTGA AGCCTATATT GTGGGGGAAC ATTTCGGCGA TGCGCGGCAG TGGCTACAGG CCGATGCGGA AGATGCCGCC ATGAATTATC GCGGCTTCAC CTTCCCGCTG TGGGGATTTC TCGCCAATAC TGATATCGCT TACGAACCAC AGCATATTGA TGCCCGGACC TGTATCGCGT GGATGGATAA CTACCGCGCC GGGCTGTCAC ATCAGCAACA ACTGCGCATG TTTAATCAAC TCGACAGCCA TGATACTGCG CGCTTTAAAA CCCTGCTGGG TAAAGACGCG GCGCGCCTGC CGCTGGCGGT GGTCTGGCTG TTTACCTGGC CCGGCGTGCC ATGTATTTAT TACGGCGATG AAGTCGGCGT GGACGGCGCA AATGACCCCA TGTGCCGCAA ACCGTTCCCG TGGGATGAAC GCAAGCAGGA CGGCAACTTG CTGGCGCTGT ACCAGCGTAT GGCGAAACTG CGTCAGCGCA GTCTGGCGCT GCGTCGTGGC GGATGCCAGG CGCTGTATGC CGAAGGTGAC GTAGTGGTAT TCGTGCGAGT TTATCAGCAG CAGCGGGCGC TGGTGGCGAT TAACCGGGGC GAGGCCTGTG AAGTGGCGCT GGAAGCGTTG CCGTTGCTGA ACGTGGCCGG ATGGCAATGT AAAACGGGAA GCGGTGACAT CCGCGAGGGA AGACTTAGTT TACCCGCGAT TTCCGCGACC GTATGGATGA ATCGTTGA
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Protein sequence | MLNAWHLPVA PFVKQHNDKL TITLWLSGEN PPSRVTLRSE FDNEEISLAM RKQRRQPQPG VTAWRATLNI ALGQPRRRYS FKLLWHDRQL WFTPQGFNRF PPARLEQFAV DVPDSGPQWV ADQIFYQIFP DRFARSQSRE AGQDKVYYHH AAGHDIVRKE WDEPLTPQAG GSTFYGGCLN GICEKLPYLK KLGVTALYLN PVFTAPSVHK YDTEDYRHVD PQFGGDRALL RLRRETQAQG MRLVLDGVFN HSGDSHAWFD RHNRSTGGAC HHPDSPWRDW YSFSPQGVAL DWLGYPSLPK LDYQSETLVD EIYRGEDSIV RHWLKAPWNM DGWRLDVVHM LGEAGGARHN LQHVAGITRA AKEAQPEAYI VGEHFGDARQ WLQADAEDAA MNYRGFTFPL WGFLANTDIA YEPQHIDART CIAWMDNYRA GLSHQQQLRM FNQLDSHDTA RFKTLLGKDA ARLPLAVVWL FTWPGVPCIY YGDEVGVDGA NDPMCRKPFP WDERKQDGNL LALYQRMAKL RQRSLALRRG GCQALYAEGD VVVFVRVYQQ QRALVAINRG EACEVALEAL PLLNVAGWQC KTGSGDIREG RLSLPAISAT VWMNR
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