Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0445 |
Symbol | proY |
ID | 6485560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 458994 |
End bp | 460424 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642735867 |
Product | putative proline-specific permease |
Protein accession | YP_002039641 |
Protein GI | 194444302 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 103 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTACACCA CGGGGCTTAA CGCCCCGTGG TTTTTTATTG TGTTGATAGG TCAGAAATTG ATGGAAAGCA ATAATAAGCT AAAGCGTGGG CTGAGCACCC GGCACATTCG CTTTATGGCA TTAGGTTCGG CAATCGGCAC CGGCCTGTTT TACGGCTCGG CGGACGCCAT CAAAATGGCG GGGCCGAGCG TGCTGTTGGC CTATATTATT GGCGGGGTCG CGGCATATAT CATTATGCGC GCATTGGGGG AAATGTCCGT TCACAACCCT GCCGCCAGCT CATTTTCGCG CTATGCGCAG GAAAACCTCG GCCCGCTTGC GGGCTACATT ACCGGCTGGA CCTACTGTTT TGAGATCCTG ATCGTCGCCA TTGCCGACGT GACCGCGTTC GGCATTTACA TGGGAGTCTG GTTCCCCGCC GTGCCGCACT GGATTTGGGT GCTTAGCGTG GTGCTGATCA TTTGCGCCAT CAACCTGATG AGCGTCAAGG TGTTCGGCGA GCTGGAGTTT TGGTTCTCCT TCTTCAAAGT CGCCACCATT ATTATCATGA TTGTCGCGGG TATCGGCATC ATTGTGTGGG GAATTGGCAA CGGCGGGCAG CCCACCGGCA TTCATAACCT GTGGAGCAAC GGCGGCTTCT TCAGCAATGG CTGGCTGGGA ATGATCATGT CGCTGCAAAT GGTGATGTTC GCTTACGGCG GGATTGAGAT TATCGGTATC ACCGCCGGGG AAGCGAAAGA CCCGGAGAAA TCCATTCCGC GCGCCATTAA CTCAGTACCG ATGCGTATCC TGGTATTTTA TGTCGGCACG CTGTTCGTCA TTATGTCTAT CTATCCGTGG AATCAGGTCG GCACAAACGG CAGCCCATTT GTGCTGACGT TCCAGCATAT GGGGATTACC TTTGCCGCCA GCATTCTGAA CTTTGTGGTA TTGACCGCCT CGCTTTCCGC TATCAATTCC GATGTGTTTG GCGTAGGCCG TATGCTGCAT GGTATGGCGG AGCAGGGGAG CGCGCCGAAA ATCTTTGCCA AAACGTCACG CCGTGGTATT CCGTGGGTCA CTGTGCTGGT GATGACGATT GCGCTGCTGT TTGCGGTTTA CCTGAACTAC ATCATGCCGG AAAACGTCTT CCTGGTGATT GCTTCGCTGG CGACGTTTGC GACGGTATGG GTATGGATTA TGATCCTGCT GTCGCAAATC GCCTTCCGTC GTCGTTTACC GCCGGAAGAG GTAAAAGCGC TGAAGTTTAA GGTGCCGGGC GGTGTCGTAA CGACGATAGC GGGTCTGATT TTCCTGGTCT TCATTATTGC GCTTATCGGC TACCATCCGG ATACCCGCAT CTCACTGTAT GTGGGCTTCG CCTGGATAGT TCTGCTGTTG ATTGGCTGGA TATTTAAACG CCGTCGCGAC CGTCAATTGG CGCAGGCGTA G
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Protein sequence | MYTTGLNAPW FFIVLIGQKL MESNNKLKRG LSTRHIRFMA LGSAIGTGLF YGSADAIKMA GPSVLLAYII GGVAAYIIMR ALGEMSVHNP AASSFSRYAQ ENLGPLAGYI TGWTYCFEIL IVAIADVTAF GIYMGVWFPA VPHWIWVLSV VLIICAINLM SVKVFGELEF WFSFFKVATI IIMIVAGIGI IVWGIGNGGQ PTGIHNLWSN GGFFSNGWLG MIMSLQMVMF AYGGIEIIGI TAGEAKDPEK SIPRAINSVP MRILVFYVGT LFVIMSIYPW NQVGTNGSPF VLTFQHMGIT FAASILNFVV LTASLSAINS DVFGVGRMLH GMAEQGSAPK IFAKTSRRGI PWVTVLVMTI ALLFAVYLNY IMPENVFLVI ASLATFATVW VWIMILLSQI AFRRRLPPEE VKALKFKVPG GVVTTIAGLI FLVFIIALIG YHPDTRISLY VGFAWIVLLL IGWIFKRRRD RQLAQA
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