Gene SNSL254_A0428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0428 
SymbolproC 
ID6486522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp443660 
End bp444469 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content56% 
IMG OID642735851 
Productpyrroline-5-carboxylate reductase 
Protein accessionYP_002039625 
Protein GI194445892 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0345] Pyrroline-5-carboxylate reductase 
TIGRFAM ID[TIGR00112] pyrroline-5-carboxylate reductase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones93 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAGA AAATCGGTTT TATTGGCTGC GGTAATATGG GCAAGGCTAT TCTTGGCGGA 
CTGATTGCCA GCGGTCAGGT ACTTCCCGGC CAGATCTGGG TCTACACCCC CTCCCCCGAT
AAAGTCGCCG CCCTGCATGA TCAGTACGGC ATTAATGCGG CGCAAAGCGC GCAGGAGGTC
GCTCAGGTCG CGGATATCGT TTTCGGCGCG GTAAAACCGG GCATTATGGT GAAAGTGCTC
AGTGAAATCT CCTCCAGCCT GAACAAAGAC TCGCTGGTGG TCTCTATCGC CGCAGGCGTA
ACGCTTGATC AGCTTGCGCG CGCGCTGGGA CACGACCGTA AAATCATTCG CGCTATGCCG
AATACGCCGT CGCTGGTCAA CGCAGGAATG ACCTCCGTCA CGCCCAACGC GCTGGTCACA
CCGGAAGATA CGGCTGATGT CCTGAATATT TTCCGCTGCT TTGGCGAGGC GGAAGTGATT
GCTGAGCCGA TGATCCATCC GGTGGTTGGC GTGAGCGGAT CTTCGCCGGC CTATGTCTTT
ATGTTTATCG AGGCGATGGC GGACGCAGCC GTTCTGGGCG GTATGCCTCG CGCTCAGGCT
TATAAATTCG CCGCGCAGGC CGTTATGGGA TCGGCGAAAA TGGTACTCGA AACCGGAAAG
CATCCCGGCG AACTGAAAGA TATGGTGTGC TCGCCTGGCG GAACGACGAT TGAAGCCGTA
CGCGTTCTGG AAGAACGTGG CTTCCGCGCT GCGGTAATAG AAGCGATGAC GAAGTGTATG
GAAAAATCAG AGGCGCTCAG TAAATCCTGA
 
Protein sequence
MEKKIGFIGC GNMGKAILGG LIASGQVLPG QIWVYTPSPD KVAALHDQYG INAAQSAQEV 
AQVADIVFGA VKPGIMVKVL SEISSSLNKD SLVVSIAAGV TLDQLARALG HDRKIIRAMP
NTPSLVNAGM TSVTPNALVT PEDTADVLNI FRCFGEAEVI AEPMIHPVVG VSGSSPAYVF
MFIEAMADAA VLGGMPRAQA YKFAAQAVMG SAKMVLETGK HPGELKDMVC SPGGTTIEAV
RVLEERGFRA AVIEAMTKCM EKSEALSKS