Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0422 |
Symbol | ddl |
ID | 6483491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 437950 |
End bp | 439044 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642735845 |
Product | D-alanyl-alanine synthetase A |
Protein accession | YP_002039619 |
Protein GI | 194446690 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.947692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAAT TGCGGGTAGG AATAGTATTT GGCGGTAAGT CGGCGGAACA TGAAGTGTCT TTGCAATCAG CGAAAAATAT CGTTGATGCG ATCGATAAAA CCCGCTTCGA CGTGGTGCTG TTAGGGATAG ATAAGGCGGG ACAATGGCAT GTTAACGATG CGGAAAATTA TTTGCAGAAT GCAGACGATC CGGCACATAT CGCGCTACGT CCTTCGGCAA TCAGTCTGGC CCAGGTGCCT GGCAAACACC AACACCAATT GATTAACGCC CAGAACGGGC AGCCGCTACC GACGGTAGAT GTTATTTTTC CTATCGTCCA CGGTACGCTG GGCGAAGACG GCTCATTGCA GGGGATGCTA CGCGTCGCAA ACTTACCGTT TGTCGGTTCA GACGTGCTGA GCTCCGCAGC CTGCATGGAT AAAGACGTCG CCAAACGACT GCTACGCGAT GCAGGACTGA ATATCGCCCC GTTTATTACA CTCACCCGAA CGAATCGTCA CGCGTTTAGT TTTGCCGAGG TTGAATCCCG TCTGGGACTG CCGCTGTTCG TTAAGCCCGC CAATCAGGGC TCTTCGGTCG GCGTCAGTAA AGTCGCTAAC GAAGCGCAAT ATCAGCAGGC GGTCGCGCTG GCTTTCGAAT TCGATCATAA AGTGGTGGTG GAGCAAGGGA TCAAAGGGCG CGAGATCGAA TGCGCCGTAT TAGGTAACGA TAACCCACAG GCCAGCACCT GCGGCGAAAT CGTACTGAAT AGCGAATTTT ACGCCTACGA TACTAAGTAT ATTGATGATA ACGGCGCACA AGTTGTCGTG CCTGCGCAGA TCCCTTCCGA GGTGAATGAT AAGATCCGCG CGATCGCGAT CCAGGCTTAT CAGACGCTGG GGTGCGCGGG TATGGCGCGT GTCGATGTCT TCTTAACGGC AGACAATGAG GTCGTGATTA ACGAGATTAA TACGCTGCCA GGTTTTACCA ATATCAGTAT GTATCCAAAA CTCTGGCAGG CGAGCGGATT GGGCTATACC GATTTGATCA GCCGCCTGAT TGAGCTGGCG CTGGAACGCC ATACGGCGAA TAACGCCTTA AAAACCACGA TGTAA
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Protein sequence | MAKLRVGIVF GGKSAEHEVS LQSAKNIVDA IDKTRFDVVL LGIDKAGQWH VNDAENYLQN ADDPAHIALR PSAISLAQVP GKHQHQLINA QNGQPLPTVD VIFPIVHGTL GEDGSLQGML RVANLPFVGS DVLSSAACMD KDVAKRLLRD AGLNIAPFIT LTRTNRHAFS FAEVESRLGL PLFVKPANQG SSVGVSKVAN EAQYQQAVAL AFEFDHKVVV EQGIKGREIE CAVLGNDNPQ ASTCGEIVLN SEFYAYDTKY IDDNGAQVVV PAQIPSEVND KIRAIAIQAY QTLGCAGMAR VDVFLTADNE VVINEINTLP GFTNISMYPK LWQASGLGYT DLISRLIELA LERHTANNAL KTTM
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