| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0400 |
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| Symbol | |
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| ID | 6484075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 413225 |
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| End bp | 414628 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642735824 |
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| Product | cytochrome bd-II oxidase subunit 1 |
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| Protein accession | YP_002039598 |
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| Protein GI | 194445894 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.603816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 5.12206e-16 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGTTTG ATGCCTTCTT TTTAGCGAGA CTCCAGTTTG CCTTTACCGT CTCTTTTCAT
ATTATTTTCC CCGCGATTAC GATTGGCTTA GCCAGTTACC TGGTGGTACT GGAAGGTTTA
TGGCTAAAAA CGCGTAATCC TGTCTGGCGC TCGCTCTATC AGTTCTGGCT CAAAATTTTT
GCCGTCAACT TCGGGATGGG CGTGGTCTCC GGTCTGGTCA TGGCTTACCA GTTCGGAACG
AACTGGAGCG GTTTTTCCCA GTTCGCCGGC AGTATCACCG GGCCTTTATT AACCTATGAA
GTGCTCACCG CATTCTTCCT GGAAGCGGGA TTCTTAGGCG TGATGCTTTT TGGCTGGAAC
AAAGTCGGGC CGGGTCTGCA TTTCTTGTCT ACCTGTATGG TGGCGTTGGG CACGTTAATG
TCGACGTTCT GGATTCTGGC GTCTAACAGC TGGATGCATA CCCCGCAGGG ATTTGAAATT
CACAACGGTC AGGTAGTCCC GGTGGACTGG TTCGCGGTGA TTTTCAACCC GTCGTTCCCG
TATCGCCTGT TGCATATGTC CGTTGCGGCG TTTTTAAGTA GCGCGATGTT TGTCGGCGCG
TCCGCTGCCT GGCATTTACT GAAAGGTAAC GATACGCCGG CTATCCGCCG TATGTTCTCG
ATGGCGTTAT GGATGGCGGT CGTGGTGGCG CCCGTTCAGG CATTGATTGG CGATATGCAT
GGCCTTAACA CCCTGAAGCA TCAGCCGGTC AAAATCGCCG CGATTGAGGG GCACTGGGAA
AATACGCCCG GCGAGCCAAC GCCGCTTACG CTGGTAGGCT GGCCGGATAT GGAGGCGGAA
CGGACCCGCT ATGCGCTTGA GATCCCGGCG TTGGGCAGTC TGATCCTGAC GCATAGCCTG
GACAAACAGG TGCCTGCGCT AAAAGATTAT CCCAAAGAGG ATCGCCCCAA CTCTACCGTG
GTGTTCTGGT CTTTCCGTCT GATGGTGGGC ATGGGCGTAC TGATGATCTT CCTGGGGCTG
GCCAGCCTGT GGCTACGCTA CCGACGCCGA CTGTATCATT CGCGGCCCTT TATGCACTTT
GCGCTGTGGA TGGGACCGTC CGGGCTTATC GCCATCCTTG CCGGATGGGT GACGACTGAA
GTAGGACGTC AGCCGTGGGT GGTCTATGGC CTGCTGCGAA CGCGTGATGC GGTTTCCGCG
CACAGCACCT TGCAAATGAG CATCAGTTTG CTGGCCTTCT TTGTGGTCTA TTCCCTGGTC
TTTGGGGTTG GCTATATTTA TATGATTCGC CTTATCCAGA AAGGGCCGCA GCCGGCGGAG
ACACCGACCG CTGAAACCGA TGGCAGACCC GCGCGTCCTA TCTCTGCCGT GGGAGAATCG
CTTGAGCAGG AGAAACGCGA ATGA
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| Protein sequence | MEFDAFFLAR LQFAFTVSFH IIFPAITIGL ASYLVVLEGL WLKTRNPVWR SLYQFWLKIF
AVNFGMGVVS GLVMAYQFGT NWSGFSQFAG SITGPLLTYE VLTAFFLEAG FLGVMLFGWN
KVGPGLHFLS TCMVALGTLM STFWILASNS WMHTPQGFEI HNGQVVPVDW FAVIFNPSFP
YRLLHMSVAA FLSSAMFVGA SAAWHLLKGN DTPAIRRMFS MALWMAVVVA PVQALIGDMH
GLNTLKHQPV KIAAIEGHWE NTPGEPTPLT LVGWPDMEAE RTRYALEIPA LGSLILTHSL
DKQVPALKDY PKEDRPNSTV VFWSFRLMVG MGVLMIFLGL ASLWLRYRRR LYHSRPFMHF
ALWMGPSGLI AILAGWVTTE VGRQPWVVYG LLRTRDAVSA HSTLQMSISL LAFFVVYSLV
FGVGYIYMIR LIQKGPQPAE TPTAETDGRP ARPISAVGES LEQEKRE
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