| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0340 |
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| Symbol | |
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| ID | 6486409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 351483 |
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| End bp | 352304 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642735769 |
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| Product | polysaccharide deacetylase family protein |
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| Protein accession | YP_002039544 |
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| Protein GI | 194444657 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.059566 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTATG CACGACATTT ACCGGTATTA ATGTATCACC ATGTCAGTGA TAAACCCGGA
CAGATAACCT TATCTCCCTG TACGTTCCGG GCGCAGATGA AATGGCTGGC TGAATCTGGC
TGGAAAACCG TTACCGCTGC AGAGGTGGAA GCTTTTTATC ATGGTGCAAG ATTGCCTCGT
AAAAGCGTCA TGCTGACCTT TGATGGCGGC TGGCTGGATA ACTGGTTGCA GGTTTTTCCG
GTGCTGCAGG AGTTTAATCT GCATGCGCAT CTCTTTCTTG TGACCAGTTT GATCAGTGAC
GGACCGGTCC GTATTCCTGC AGGCGAACCG GTGTACTCTC ATGATGAGTG TCAGATGCTG
GTTAAACAAG GCCGGGCTGA TGAGGTCATG CTGCGCTGGT CAGAGGTCCG GGAGATGCAC
CTCAGTGGCC TTGTTGAGTT TCACTCGCAC ACGCACACCC ACCGACGCTG GGACCAGAAA
CCTGTGTCCC GTAATCCGTC GGATTTGCTT CGTGTCGATA TTCTTCTTAG TCGTAAGCGG
ATGAGGGAGA TGCTGGGTTA TTGCAGTCAG CATCTGTGCT GGCCTGAGGG CTGGTATTGT
TCTGACTATA TTCATGTGGC TGAAGAGCTG GGGTTCACAT ACCTGTATAC CACAGAAAGG
CGTATGAACA ATCCAGTCAT CGGTTCACAG CGTATTGGTC GTATCAACAC AAAGGAGCGA
AAGAATGTGG GCTGGCTGAA ACGTCGTCTG TTTTATCACA CCACGCCCGG ATTTTCTTCG
CTGCTGGCCC GGCATAAGGG GGCACGTCGG ATAGCTGACT GA
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| Protein sequence | MSYARHLPVL MYHHVSDKPG QITLSPCTFR AQMKWLAESG WKTVTAAEVE AFYHGARLPR
KSVMLTFDGG WLDNWLQVFP VLQEFNLHAH LFLVTSLISD GPVRIPAGEP VYSHDECQML
VKQGRADEVM LRWSEVREMH LSGLVEFHSH THTHRRWDQK PVSRNPSDLL RVDILLSRKR
MREMLGYCSQ HLCWPEGWYC SDYIHVAEEL GFTYLYTTER RMNNPVIGSQ RIGRINTKER
KNVGWLKRRL FYHTTPGFSS LLARHKGARR IAD
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