| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0305 |
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| Symbol | |
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| ID | 6482268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 320859 |
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| End bp | 321344 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642735738 |
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| Product | hemolysin-coregulated protein |
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| Protein accession | YP_002039513 |
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| Protein GI | 194443822 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0351717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.0452208 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTTATG ACATTTTTCT GAAAATTGAC GGCATTGACG GCGAGTCAAT GGATGACAAA
CACAAAAATG AAATTGAAGT ACTGAGCTGG CGCTGGAATA TTCATCAGGA ATCCACCATG
CACGCCGGTA GCGGTCTCGG TTCCGGTAAG GTCTCCGTCA CTAATCTTTC ATTTGAACAT
TACATCGATC GCGCCAGCCC GAACCTGTTC AAATACTGCT CTTCCGGTAA GCACATTCCG
CAGGCCATTC TGGTTATGCG TAAGGCTGGC GGCAATCCGC TGGAGTACCT CAAGTACACT
TTCACAGATC TGATTATTGC AATGGTATCG CCTAGCGGAA GCCAGGGAGG GGAAATTGCG
TCTCGCGAAT CAATTGAACT CTCCTTCAGC ACCGTGAAGC AGGAATACGT GGTGCAGAAC
CAGCAGGGCG GCAGCGGCGG CACCATCACC GCAGGCTACG ACTTCAAGGC CAACAAAGAA
ATTTAA
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| Protein sequence | MSYDIFLKID GIDGESMDDK HKNEIEVLSW RWNIHQESTM HAGSGLGSGK VSVTNLSFEH
YIDRASPNLF KYCSSGKHIP QAILVMRKAG GNPLEYLKYT FTDLIIAMVS PSGSQGGEIA
SRESIELSFS TVKQEYVVQN QQGGSGGTIT AGYDFKANKE I
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