| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0299 |
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| Symbol | |
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| ID | 6485919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 315913 |
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| End bp | 316455 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642735732 |
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| Product | type VI secretion protein |
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| Protein accession | YP_002039507 |
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| Protein GI | 194442796 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.506089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 0.154697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATCA ACAATAGCGC GCAGAAATTC ATCGCGCGCA ACCGCGCGCC GCGCGTGCAG
ATTGAATATG ACGTAGAGAT TTACGGCTCT GAGAAAAAAA TCGAGCTGCC GTTCGTGATG
GCGGTGCTGG CCGATCTGGC CGGGAAACCG CGTGAAGAAC TGCCGCCGGT GACGGATCGC
AAATTCCTCG ATATTGATAT TGATAACTTC AATGAGCGCA TGAAAGCCAT TGCGCCGCGC
GTGGCGTTCG CTGTGCCGAA TACGCTGACG GGTGAAGGTC AGTTGATGGT CGATATCACG
CTGGAAAATA TGGACGACTT TTCGCCGGCA CAGATTGCCC GCAAGGTGGA CGCCCTGAAC
CAGTTACTGG AAGCCCGCAC TCAACTGGCG AACCTCCAGA CCTACATGGA TGGCAAGGCC
GGGGCGGAAA ATCTGGTCAA TAAACTGTTG CAGGACCCGA CTCTGCTGAA AACGCTGGCG
AATGCGCCGA AATCGGCCGC TACCCAGCAA GGTGTGTCAG CGGATAATGA ATCAGCGGAA
TAA
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| Protein sequence | MAINNSAQKF IARNRAPRVQ IEYDVEIYGS EKKIELPFVM AVLADLAGKP REELPPVTDR
KFLDIDIDNF NERMKAIAPR VAFAVPNTLT GEGQLMVDIT LENMDDFSPA QIARKVDALN
QLLEARTQLA NLQTYMDGKA GAENLVNKLL QDPTLLKTLA NAPKSAATQQ GVSADNESAE
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