| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0294 |
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| Symbol | |
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| ID | 6482206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 310602 |
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| End bp | 311096 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642735727 |
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| Product | type VI secretion system lysozyme-related protein |
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| Protein accession | YP_002039502 |
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| Protein GI | 194445579 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 0.214716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGT CTCGTTTTAC ACCCGCTAAC CACCTGCTGC CCACCCTATT TGATCGGCTG
TGTGACAATG CCCCGTATCA GAAAATTGAC CGGGATATCA GCGTCACGCC GGTACAACTG
AAGGAGATCA TTCGTCGGGA TCTCTCCTTT TTGCTCAATA CCATTAGCCA CGAGGGTGAC
ATCGACGCCC GGCGCTATCC GCAGGCGGCG GCGTCAGTGC TCAACTATGG CCTGCCGCCG
CTGGCGGGCA GCTTTATGTA TGAGCATAAG TGGGACGATA TCAGCGAGGC GATCCGGCGC
GCCATTATCC GTTTCGAACC CCGGCTGAAC GCCGCCACAC TCAGGGTCAC GCCCTTGCTC
GATAAAACCC GGCAGGGTAG CTATAACACG CTACAGTTTG AAATTCGCGG ACAAATTCTG
ACGCAGCCGT ATCCCACGGA GTTTCTGGTA CGCAGCGCGC TGGATATGGA GCTGAGCCGC
ATTACGTTCT TTTAA
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| Protein sequence | MSTSRFTPAN HLLPTLFDRL CDNAPYQKID RDISVTPVQL KEIIRRDLSF LLNTISHEGD
IDARRYPQAA ASVLNYGLPP LAGSFMYEHK WDDISEAIRR AIIRFEPRLN AATLRVTPLL
DKTRQGSYNT LQFEIRGQIL TQPYPTEFLV RSALDMELSR ITFF
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