Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0248 |
Symbol | lpxD |
ID | 6484778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 267582 |
End bp | 268607 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642735684 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | YP_002039466 |
Protein GI | 194446270 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 0.601314 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTTCAA TTCGACTGGC TGACTTAGCA GAACAGTTGG ATGCAGAATT ACACGGTGAT GGCGATATCG TCATCACCGG CGTTGCGTCC ATGCAATCTG CAACAACAGG CCACATTACG TTTATGGTAA ATCCTAAGTA CCGTGAACAC TTAGGTTTAT GCCAGGCTTC TGCGGTTGTC ATGACGCAGG ACGATCTTCC TTTTGCCAAG AGCGCGGCGC TGGTAGTTAA AAATCCCTAC CTGACCTACG CGCGCATGGC GCAAATTTTA GATACTACGC CGCAGCCCGC GCAGAATATC GCGCCAAGTG CCGTGATTGA TGCGACGGCA ACGCTGGGTA GCAATGTTTC AGTCGGCGCG AATGCGGTGA TTGAATCTGG CGTACAACTG GGCGATAACG TGGTTATCGG CGCAGGCTGT TTCGTCGGAA AAAATAGCAA AATCGGGGCG GGTTCACGCT TGTGGGCGAA CGTAACGATT TACCACGACA TTCAGATCGG TGAGAATTGC CTGATCCAGT CCAGTACGGT GATCGGCGCG GACGGTTTTG GCTACGCTAA CGATCGTGGC AACTGGGTGA AGATCCCACA ACTGGGCCGG GTCATTATTG GCGATCGTGT CGAGATCGGC GCTTGTACCA CCATTGACCG TGGCGCGTTG GATGATACTG TTATTGGCAA TGGCGTGATT ATTGATAATC AGTGCCAGAT TGCACATAAC GTCGTGATTG GCGACAATAC GGCAGTTGCC GGTGGCGTCA TTATGGCGGG TAGCCTGAAG ATTGGCCGTT ACTGCATGAT TGGCGGCGCC AGCGTGATCA ATGGGCATAT GGAAATATGC GACAAAGTCA CGGTAACTGG CATGGGTATG GTGATGCGTC CCATCACGGA ACCGGGCGTC TACTCCTCAG GCATTCCGCT GCAACCCAAC AAAGTATGGC GTAAAACTGC TGCACTGGTG ATGAACATTG ATGATATGAG CAAGCGTCTC AAAGCGATTG AGCGCAAGGT TAATCAACAA GACTAA
|
Protein sequence | MPSIRLADLA EQLDAELHGD GDIVITGVAS MQSATTGHIT FMVNPKYREH LGLCQASAVV MTQDDLPFAK SAALVVKNPY LTYARMAQIL DTTPQPAQNI APSAVIDATA TLGSNVSVGA NAVIESGVQL GDNVVIGAGC FVGKNSKIGA GSRLWANVTI YHDIQIGENC LIQSSTVIGA DGFGYANDRG NWVKIPQLGR VIIGDRVEIG ACTTIDRGAL DDTVIGNGVI IDNQCQIAHN VVIGDNTAVA GGVIMAGSLK IGRYCMIGGA SVINGHMEIC DKVTVTGMGM VMRPITEPGV YSSGIPLQPN KVWRKTAALV MNIDDMSKRL KAIERKVNQQ D
|
| |