Gene SNSL254_A0248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0248 
SymbollpxD 
ID6484778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp267582 
End bp268607 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content52% 
IMG OID642735684 
ProductUDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
Protein accessionYP_002039466 
Protein GI194446270 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.601314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCAA TTCGACTGGC TGACTTAGCA GAACAGTTGG ATGCAGAATT ACACGGTGAT 
GGCGATATCG TCATCACCGG CGTTGCGTCC ATGCAATCTG CAACAACAGG CCACATTACG
TTTATGGTAA ATCCTAAGTA CCGTGAACAC TTAGGTTTAT GCCAGGCTTC TGCGGTTGTC
ATGACGCAGG ACGATCTTCC TTTTGCCAAG AGCGCGGCGC TGGTAGTTAA AAATCCCTAC
CTGACCTACG CGCGCATGGC GCAAATTTTA GATACTACGC CGCAGCCCGC GCAGAATATC
GCGCCAAGTG CCGTGATTGA TGCGACGGCA ACGCTGGGTA GCAATGTTTC AGTCGGCGCG
AATGCGGTGA TTGAATCTGG CGTACAACTG GGCGATAACG TGGTTATCGG CGCAGGCTGT
TTCGTCGGAA AAAATAGCAA AATCGGGGCG GGTTCACGCT TGTGGGCGAA CGTAACGATT
TACCACGACA TTCAGATCGG TGAGAATTGC CTGATCCAGT CCAGTACGGT GATCGGCGCG
GACGGTTTTG GCTACGCTAA CGATCGTGGC AACTGGGTGA AGATCCCACA ACTGGGCCGG
GTCATTATTG GCGATCGTGT CGAGATCGGC GCTTGTACCA CCATTGACCG TGGCGCGTTG
GATGATACTG TTATTGGCAA TGGCGTGATT ATTGATAATC AGTGCCAGAT TGCACATAAC
GTCGTGATTG GCGACAATAC GGCAGTTGCC GGTGGCGTCA TTATGGCGGG TAGCCTGAAG
ATTGGCCGTT ACTGCATGAT TGGCGGCGCC AGCGTGATCA ATGGGCATAT GGAAATATGC
GACAAAGTCA CGGTAACTGG CATGGGTATG GTGATGCGTC CCATCACGGA ACCGGGCGTC
TACTCCTCAG GCATTCCGCT GCAACCCAAC AAAGTATGGC GTAAAACTGC TGCACTGGTG
ATGAACATTG ATGATATGAG CAAGCGTCTC AAAGCGATTG AGCGCAAGGT TAATCAACAA
GACTAA
 
Protein sequence
MPSIRLADLA EQLDAELHGD GDIVITGVAS MQSATTGHIT FMVNPKYREH LGLCQASAVV 
MTQDDLPFAK SAALVVKNPY LTYARMAQIL DTTPQPAQNI APSAVIDATA TLGSNVSVGA
NAVIESGVQL GDNVVIGAGC FVGKNSKIGA GSRLWANVTI YHDIQIGENC LIQSSTVIGA
DGFGYANDRG NWVKIPQLGR VIIGDRVEIG ACTTIDRGAL DDTVIGNGVI IDNQCQIAHN
VVIGDNTAVA GGVIMAGSLK IGRYCMIGGA SVINGHMEIC DKVTVTGMGM VMRPITEPGV
YSSGIPLQPN KVWRKTAALV MNIDDMSKRL KAIERKVNQQ D