Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0246 |
Symbol | yaeT |
ID | 6484221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 264538 |
End bp | 266970 |
Gene Length | 2433 bp |
Protein Length | 810 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642735682 |
Product | outer membrane protein assembly factor YaeT |
Protein accession | YP_002039464 |
Protein GI | 194443720 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.24449 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 0.197895 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGATGA AAAAGTTGCT CATAGCGTCG CTGCTGTTCA GCAGCGCCAC CGTATACGGT GCTGAAGGGT TCGTAGTGAA GGACATTCAT TTCGAAGGCC TGCAGCGAGT CGCCGTTGGT GCGGCTCTCC TCAGTATGCC GGTGCGCACA GGCGACACGG TTAATGATGA AGATATCAGT AACACCATTC GCGCTCTGTT CGCCACCGGC AACTTTGAGG ACGTCCGCGT CCTGCGCGAT GGTAATACCC TTCTGGTTCA GGTAAAAGAA CGTCCGACCA TTGCCAGCAT CACTTTCTCC GGGAACAAGT CGGTGAAAGA TGACATGCTC AAGCAAAACC TCGAAGCGTC TGGCGTACGT GTTGGCGAGT CTCTGGATCG CACCACGCTG TCTGATATCG AAAAAGGTCT GGAAGACTTT TACTATAGCG TAGGTAAATA CAGCGCCAGC GTTAAGGCGG TCGTCACGCC GCTGCCGCGC AACCGTGTTG ATCTTAAACT GGTGTTCCAG GAGGGCGTAT CGGCGAAGAT CCAACAGATC AACATCGTCG GTAACCATGC CTTTAGCACC GAAGAACTCA TTTCTCATTT CCAGTTGCGT GACGAAGTGC CGTGGTGGAA CGTCGTCGGC GATCGTAAAT ACCAGAAACA GAAGCTGGCG GGCGACCTTG AAACCTTGCG CAGCTACTAT CTGGATCGCG GCTACGCGCG TTTCAATATT GACTCCACGC AAGTGAGTCT GACGCCGGAT AAGAAAGGGA TCTACATCAC CGTCAATATC ACCGAAGGCG ATCAGTACAA GCTTTCCGGG GTTCAGGTGA GCGGTAACCT GGCCGGACAT TCCGCTGAAA TTGAGAAACT GACGAAAATT GAACCGGGCG AGCTCTATAA CGGCACCAAA GTGACCAAAA TGGAAGATGA CATCAAAAAG CTTCTGGGTC GCTATGGTTA CGCCTATCCG CGCGTGCAGT CACAGCCTGA AATTAACGAT GCTGACAAAA CCGTAAAACT GCGCGTAAAC GTCGATGCGG GCAACCGTTT CTACGTGCGT AAGATCCGCT TTGAAGGCAA CGACACCTCA AAAGATTCCG TTCTGCGCCG TGAAATGCGC CAGATGGAAG GGGCGTGGCT GGGCAGCGAC CTGGTTGACC AGGGGAAAGA GCGTCTGAAC CGTCTCGGCT TCTTTGAAAC CGTCGACACC GACACGCAGC GCGTTCCGGG TAGCCCGGAT CAGGTTGATG TGGTGTACAA GGTGAAAGAG CGCAACACCG GTAGCTTTAA CTTCGGTATC GGTTACGGTA CAGAAAGCGG CGTTAGCTTC CAGGCCGGCG TTCAGCAGGA CAACTGGTTA GGTACTGGTT ATTCCGTGGG GATTAACGGC ACCAAAAACG ACTACCAGAC CTACAGCGAA CTGTCCGTTA CTAACCCATA CTTTACCGTT GACGGCGTGA GCCTCGGTGG TCGTATCTTC TATAACGACT TCCAGGCGGA CGATGCGGAT CTATCCGACT ATACCAACAA GAGTTACGGT ACGGATGTGA CGCTTGGCTT CCCCATCAAC GAGTACAACA CGTTGCGTGC TGGTTTAGGG TATGTGCATA ACTCCCTGTC CAATATGGAA CCGCAGGTTG CAATGTGGCG TTATCTGGCA TCAATGGGTC AGTATCCGAG TACTAATGAT CAGGATAATA GTTTTAGCAC TGATGACTTC ACCTTTAACT ACGGCTGGAC CTACAACAAA CTAGACCGTG GTTACTTCCC GACGGAAGGT ACGCGTATCA ACCTGACGGG TAAGGTGACG ATTCCGGGAT CGGATAACGA ATACTATAAA GCGACGTTGG ATACCGCGAC CTATGTACCG ATCGATAACG ATCATAAGTG GGTCATTCTG GGCCGTACCC GCTTTGGTTA TGGCGATGGT TTAGGCGGTA AAGAAATGCC GTTCTATGAG AACTTCTATG CCGGTGGTTC CAGTACCGTT CGTGGCTTCC AGTCCAATAC CATTGGTCCT AAGGCGGTCT ATTATCCCTA TAACCCTAAA AATTACGATG CTGATGAAGA CTACGATTGC GCGACGCAGG ACGGCGCAAA AGATATGTGT AAGTCGGATG ATGCGGTAGG GGGTAACGCG ATGGCGGTCG CCAGCCTGGA ATTTATCACG CCGACGCCGT TTATCAGCGA GAAATATGCT AATTCGGTCC GTACTTCTTT CTTCTGGGAT ATGGGGACCG TCTGGGATAC TAACTGGGAT TCCAGCCAGT ATTCTGGTTA TCCGGACTAC AGCGATCCGA GCAACATCCG TATGTCCGCG GGTATCGCAT TACAATGGAT GTCCCCATTG GGGCCGTTGG TCTTCTCCTA CGCCCAGCCG TTTAAAAAGT ACGATGGAGA CAAAGCCGAG CAGTTCCAGT TTAACATTGG TAAAACCTGG TAA
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Protein sequence | MAMKKLLIAS LLFSSATVYG AEGFVVKDIH FEGLQRVAVG AALLSMPVRT GDTVNDEDIS NTIRALFATG NFEDVRVLRD GNTLLVQVKE RPTIASITFS GNKSVKDDML KQNLEASGVR VGESLDRTTL SDIEKGLEDF YYSVGKYSAS VKAVVTPLPR NRVDLKLVFQ EGVSAKIQQI NIVGNHAFST EELISHFQLR DEVPWWNVVG DRKYQKQKLA GDLETLRSYY LDRGYARFNI DSTQVSLTPD KKGIYITVNI TEGDQYKLSG VQVSGNLAGH SAEIEKLTKI EPGELYNGTK VTKMEDDIKK LLGRYGYAYP RVQSQPEIND ADKTVKLRVN VDAGNRFYVR KIRFEGNDTS KDSVLRREMR QMEGAWLGSD LVDQGKERLN RLGFFETVDT DTQRVPGSPD QVDVVYKVKE RNTGSFNFGI GYGTESGVSF QAGVQQDNWL GTGYSVGING TKNDYQTYSE LSVTNPYFTV DGVSLGGRIF YNDFQADDAD LSDYTNKSYG TDVTLGFPIN EYNTLRAGLG YVHNSLSNME PQVAMWRYLA SMGQYPSTND QDNSFSTDDF TFNYGWTYNK LDRGYFPTEG TRINLTGKVT IPGSDNEYYK ATLDTATYVP IDNDHKWVIL GRTRFGYGDG LGGKEMPFYE NFYAGGSSTV RGFQSNTIGP KAVYYPYNPK NYDADEDYDC ATQDGAKDMC KSDDAVGGNA MAVASLEFIT PTPFISEKYA NSVRTSFFWD MGTVWDTNWD SSQYSGYPDY SDPSNIRMSA GIALQWMSPL GPLVFSYAQP FKKYDGDKAE QFQFNIGKTW
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