Gene SNSL254_A0244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0244 
SymbolcdsA 
ID6486817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp262285 
End bp263142 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content53% 
IMG OID642735680 
ProductCDP-diglyceride synthase 
Protein accessionYP_002039462 
Protein GI194443234 
COG category[I] Lipid transport and metabolism 
COG ID[COG0575] CDP-diglyceride synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.306198 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGAAGT ATCGCCTGAT TTCTGCTTTT GTGTTAATAC CCGCGGTCAT CGCTGCGCTT 
TTTTTATTGC CGCCGGTGGG GTTCGCCATT ATTACGCTGG TTGTCTGTAT GCTGGCCGCG
TGGGAATGGG GACAGTTAAG CGGTTTCGCC GCGCGTTCAC AGCGGGTTTG GCTGGCGGTG
CTGTGTGGTC TGTTATTGGC GCTGATGCTA TTTTTGTTGC CTGAGTATCA TCACAACATT
CGTCAACCGC TGGTTGAGAT GTCGCTTTGG GCATCGTTAG GATGGTGGGT TGTCGCGCTA
CTGCTGGTGC TATTTTATCC CGGTTCGGCG GCAATCTGGC GCAACTCAAA AACATTGCGT
CTCATTTTCG GTTTGTTAAC TATTGTGCCA TTTTTCTGGG GCATGCTGGC GCTGCGCGCC
TGGCACTATG ACGAGAATCA TTACAGTGGC GCAATATGGC TACTCTATGT CATGATCCTG
GTCTGGGGAG CGGACTCTGG CGCGTATATG TTTGGTAAAT TATTTGGCAA ACATAAGCTG
GCGCCGAAGG TTTCTCCGGG TAAAACCTGG CAAGGGTTTA TCGGCGGGCT TGCTACGGCT
GCCGTGATCT CATGGGGTTA CGGTATGTGG GCGAATCTGA ATGTTGCGCC TGTTATCTTG
CTGATTTGCT CTGTAGTGGC GGCTCTGGCT TCTGTACTGG GCGACCTCAC CGAGAGTATG
TTTAAGCGCG AAGCAGGAAT TAAGGATAGC GGCCACTTGA TTCCAGGCCA TGGCGGCATT
CTGGACCGAA TTGACAGCCT GACGGCTGCC GTACCGGTCT TTGCTTGCCT GTTGTTACTG
GTGTTCAGGA CGCTCTAA
 
Protein sequence
MLKYRLISAF VLIPAVIAAL FLLPPVGFAI ITLVVCMLAA WEWGQLSGFA ARSQRVWLAV 
LCGLLLALML FLLPEYHHNI RQPLVEMSLW ASLGWWVVAL LLVLFYPGSA AIWRNSKTLR
LIFGLLTIVP FFWGMLALRA WHYDENHYSG AIWLLYVMIL VWGADSGAYM FGKLFGKHKL
APKVSPGKTW QGFIGGLATA AVISWGYGMW ANLNVAPVIL LICSVVAALA SVLGDLTESM
FKREAGIKDS GHLIPGHGGI LDRIDSLTAA VPVFACLLLL VFRTL