| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0242 |
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| Symbol | dxr |
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| ID | 6485427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 259918 |
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| End bp | 261201 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642735678 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_002039460 |
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| Protein GI | 194446182 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 0.353021 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTACAAAG CGCCGCGCAG AAGACATTAT CAGGTCTCCT GTGCGGCGTT TTGCTTTTTA
TTCCGTTTCA ACACTTCTGG ACGTTTCATG AAGCAATTAA CCATTCTGGG CTCGACCGGC
TCTATTGGTT GCAGCACACT GGACGTGGTG CGCCATAATC CTGATAGCTT CCGCGTTATC
GCGCTGGTGG CGGGTAAAAA TGTCGCCCGC ATGGCGGAGC AGTGCCTGGA GTTCTCGCCG
CGTTATGCCG TGATGGACGA TACGTCGAGC GCAGAACAGC TCAAAATAAT GCTTCAGCAG
CATGGCAGCC GCACCGAGGT TCTGAGCGGT CAGCAGGCTG CCTGTGAGAT GGCGGCGCTT
GATGAGGTCG GGCATGTGAT GGCGGCCATT GTGGGCGCGG CTGGTTTACT GCCGACCCTG
GCGGCGATTC GCGCAGGGAA GACGATTCTG CTGGCGAATA AAGAATCGCT GGTGACCTGC
GGGCGGCTGT TTATGGACGA AGTAAAACGC AGCAACGCCC GGCTTTTACC CGTCGATAGC
GAACATAACG CGATTTTTCA GAGTTTGCCG CAATCTATTC AGCATAATCT GGGATACGCT
GACCTTGAGC AAAATGGCGT AACGTCGATT TTGCTTACCG GGTCTGGTGG CCCGTTTCGT
GAAACGCCCA TGTGCGATCT GGCAGCGATG ACGCCGGATC AGGCATGTCG TCATCCGAAC
TGGTCGATGG GGCGAAAAAT CTCCGTCGAC TCCGCCACCA TGATGAATAA AGGTCTGGAA
TACATTGAAG CGCGTTGGTT ATTTAATGCC AGCGCACGTC AGATGGAAGT GTTGATCCAT
CCGCAATCGG TCATTCATTC GATGGTGCGT TATCAGGACG GCAGCGTCCT GGCGCAGCTT
GGAGAACCTG ACATGCGTAC GCCTATTGCG CATACGATGG CATGGCCGAA TCGCGTCACG
TCCGGCGCGC AGCCGCTCGA TTTTTGCAAA CTCAGCGCGC TGACGTTTAG CGCGCCAGAT
TATCAGCGTT ATCCTTGCCT GAAGCTGGCG ATGGAGGCGT TTGAGCAAGG TCAGGCGGCA
ACGACGGCGC TCAATGCGGC AAACGAAATC ACCGTTGCCG CGTTTCTGGC GCAACAGATT
CGTTTTACCG ATATCGCCGG GCTCAATTTA GCGGTGCTGG AGAGGATGGA TTTACACGAA
CCGGCAAGCG TTGAGGACGT ATTGCAGGTT GACGCCATCG CGCGTGAAGT AGCCAGAAAA
CAAGTGATAC GGCTCTCACG CTGA
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| Protein sequence | MYKAPRRRHY QVSCAAFCFL FRFNTSGRFM KQLTILGSTG SIGCSTLDVV RHNPDSFRVI
ALVAGKNVAR MAEQCLEFSP RYAVMDDTSS AEQLKIMLQQ HGSRTEVLSG QQAACEMAAL
DEVGHVMAAI VGAAGLLPTL AAIRAGKTIL LANKESLVTC GRLFMDEVKR SNARLLPVDS
EHNAIFQSLP QSIQHNLGYA DLEQNGVTSI LLTGSGGPFR ETPMCDLAAM TPDQACRHPN
WSMGRKISVD SATMMNKGLE YIEARWLFNA SARQMEVLIH PQSVIHSMVR YQDGSVLAQL
GEPDMRTPIA HTMAWPNRVT SGAQPLDFCK LSALTFSAPD YQRYPCLKLA MEAFEQGQAA
TTALNAANEI TVAAFLAQQI RFTDIAGLNL AVLERMDLHE PASVEDVLQV DAIAREVARK
QVIRLSR
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