Gene SNSL254_A0239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0239 
Symboltsf 
ID6482456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp257439 
End bp258290 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content53% 
IMG OID642735675 
Productelongation factor Ts 
Protein accessionYP_002039457 
Protein GI194443244 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.62558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA TTACCGCATC CCTGGTAAAA GAGCTGCGTG AGCGTACCGG CGCAGGCATG 
ATGGATTGCA AAAAAGCGCT GACTGAAGCG AATGGCGACA TTGAGCTGGC AATCGAAAAC
ATGCGTAAGT CCGGCGCTAT CAAAGCGGCG AAAAAAGCAG GCAACGTGGC TGCTGACGGC
GTAATCAAAA CCAAAATCGA CGGCAACGTC GCTTTCATTC TGGAAGTTAA CTGCCAGACT
GACTTCGTGG CTAAAGATGC TGGCTTCCAG GCATTTGCTG ACAAAGTGCT GGACGCCGCT
GTTGCTGGCA AAATCACTGA CGTAGAAGTC CTGAAAGCGC AGTTCGAAGA AGAGCGCGTT
GCTCTGGTAG CGAAAATCGG CGAGAACATC AACATTCGTC GCGTCGCTTC CCTGGAAGGC
GACGTTCTGG GTTCTTACCA GCACGGTGCG CGCATCGGCG TTCTGGTTGC CGCTAAAGGC
GCTGACGAAG AGCTGGTTAA ACAGCTGGCG ATGCACGTTG CGGCAAGCAA GCCGGAATTC
GTTAAGCCGG AAGACGTGTC TGCTGACGTG GTAGAGAAAG AGTACCAGGT ACAGCTGGAC
ATCGCGATGC AGTCCGGTAA GCCGAAAGAA ATCGCAGAGA AAATGGTTGA AGGCCGCATG
AAGAAATTCA CCGGCGAAGT TTCTCTGACT GGTCAGCCTT TCGTCATGGA ACCGAGCAAA
TCTGTTGGCC AACTGCTGAA AGAGCACAAC GCTGACGTGA CTGGCTTCAT CCGCTTTGAA
GTGGGCGAAG GCATTGAGAA AGTCGAGACT GACTTTGCAG CAGAAGTTGC TGCGATGTCT
AAGCAGTCCT GA
 
Protein sequence
MAEITASLVK ELRERTGAGM MDCKKALTEA NGDIELAIEN MRKSGAIKAA KKAGNVAADG 
VIKTKIDGNV AFILEVNCQT DFVAKDAGFQ AFADKVLDAA VAGKITDVEV LKAQFEEERV
ALVAKIGENI NIRRVASLEG DVLGSYQHGA RIGVLVAAKG ADEELVKQLA MHVAASKPEF
VKPEDVSADV VEKEYQVQLD IAMQSGKPKE IAEKMVEGRM KKFTGEVSLT GQPFVMEPSK
SVGQLLKEHN ADVTGFIRFE VGEGIEKVET DFAAEVAAMS KQS