Gene SNSL254_A0221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0221 
Symbol 
ID6485306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp237887 
End bp238417 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content55% 
IMG OID642735658 
Productminor fimbrial subunit StfG 
Protein accessionYP_002039440 
Protein GI194443734 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000010852 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.588563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAA GACAGGCGTT ATTACACGGC GCGGCCTGCA TCCTCTGTGG GGCGCTGATA 
TTGCCGGTCT CAGCGGCAGA TAACCTGCAT TTTTCCGGTA GCCTGGTGGC CAGTCCTTGC
ACGCTCACGA TGCAGGGGAC GGGGATTGCC GAAGTCGATT TTTCGTCGCT TGACAGTTCT
GATTTCACTC CCGACGGCCA GTCTGCTCGT AAGCCTTTGG TGTTTGAACT CACGGATTGC
GATTCGGCGC TGAGTAACGG GGTGCAGGTG ACTTTCACTG GAACCGAAGC GACCGGAATG
CGCGGTATCC TGGCCATCGA TAGCCATTCA GGTGCTTTTG GGATCGGGAT TGGTATTGAA
ACGCGATCCG GTGTTCCCGT GGGCATGAAC GATAAAGAGG GTGCGATATT CACGCTGGTG
ACGGGGAATA ACGCGCTAAA CCTGAATGCC TGGGTACAAC GCCTTCCTGG CGAGGACCTG
ATTCCGGGAA CGTTCTTCGC AAGCGCACTA GTTACATTTG AGTATTTATG A
 
Protein sequence
MAKRQALLHG AACILCGALI LPVSAADNLH FSGSLVASPC TLTMQGTGIA EVDFSSLDSS 
DFTPDGQSAR KPLVFELTDC DSALSNGVQV TFTGTEATGM RGILAIDSHS GAFGIGIGIE
TRSGVPVGMN DKEGAIFTLV TGNNALNLNA WVQRLPGEDL IPGTFFASAL VTFEYL