Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0219 |
Symbol | |
ID | 6483473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 236902 |
End bp | 237414 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642735656 |
Product | putative minor fimbrial subunit |
Protein accession | YP_002039438 |
Protein GI | 194444755 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000129948 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 0.612326 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGCAAT GGCGGTTACG GCTGGGCACG GTAACGTGTG CGGCCATGCT GAGTGCGGTC AGTATGCCGC TGGCAGCGGG AAGTAAGACG GTCAACATGA CGCTGACGAT AGTCGTTAAT GCCGCGCCGC CCTGTACTGT GACCGGCGGT GAGGTGGAAT TTGGCAATGT GTTGACGACG AAAGTGGATG GGGTGAATTA CCGGCAGGCG GTGGGCTATA GCCTGAGCTG TAACGGCAGA GTGAGCGATT ACCTGAAGTT ACAGATTCAG GGGAATGCGG TGACTATCAA TGGCGAGTCG GTATTGCAAA CCGATGTCGA TGGATTGGGT ATCCGTCTGC AAACCGCCAC GGATGGCGCG CTGATTTCAC CCGGCAATAC GCAATGGTTG CCATTTCAAT ACAGCGGCGG CAGCGGTCCG GCCATTGAGG CAATTCCCGT CAAAAATAAT GGCGTAACGT TAACAGGTGG CGCGTTTAAC GCAGGCGCCA CGTTGGTGGT GGATTACCAA TGA
|
Protein sequence | MRQWRLRLGT VTCAAMLSAV SMPLAAGSKT VNMTLTIVVN AAPPCTVTGG EVEFGNVLTT KVDGVNYRQA VGYSLSCNGR VSDYLKLQIQ GNAVTINGES VLQTDVDGLG IRLQTATDGA LISPGNTQWL PFQYSGGSGP AIEAIPVKNN GVTLTGGAFN AGATLVVDYQ
|
| |