Gene SNSL254_A0219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0219 
Symbol 
ID6483473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp236902 
End bp237414 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content56% 
IMG OID642735656 
Productputative minor fimbrial subunit 
Protein accessionYP_002039438 
Protein GI194444755 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000129948 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.612326 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCAAT GGCGGTTACG GCTGGGCACG GTAACGTGTG CGGCCATGCT GAGTGCGGTC 
AGTATGCCGC TGGCAGCGGG AAGTAAGACG GTCAACATGA CGCTGACGAT AGTCGTTAAT
GCCGCGCCGC CCTGTACTGT GACCGGCGGT GAGGTGGAAT TTGGCAATGT GTTGACGACG
AAAGTGGATG GGGTGAATTA CCGGCAGGCG GTGGGCTATA GCCTGAGCTG TAACGGCAGA
GTGAGCGATT ACCTGAAGTT ACAGATTCAG GGGAATGCGG TGACTATCAA TGGCGAGTCG
GTATTGCAAA CCGATGTCGA TGGATTGGGT ATCCGTCTGC AAACCGCCAC GGATGGCGCG
CTGATTTCAC CCGGCAATAC GCAATGGTTG CCATTTCAAT ACAGCGGCGG CAGCGGTCCG
GCCATTGAGG CAATTCCCGT CAAAAATAAT GGCGTAACGT TAACAGGTGG CGCGTTTAAC
GCAGGCGCCA CGTTGGTGGT GGATTACCAA TGA
 
Protein sequence
MRQWRLRLGT VTCAAMLSAV SMPLAAGSKT VNMTLTIVVN AAPPCTVTGG EVEFGNVLTT 
KVDGVNYRQA VGYSLSCNGR VSDYLKLQIQ GNAVTINGES VLQTDVDGLG IRLQTATDGA
LISPGNTQWL PFQYSGGSGP AIEAIPVKNN GVTLTGGAFN AGATLVVDYQ