Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0218 |
Symbol | |
ID | 6482991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 236131 |
End bp | 236883 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642735655 |
Product | chaperone protein PapD |
Protein accession | YP_002039437 |
Protein GI | 194443324 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000225767 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 0.548646 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCCAT TAAAACGTTA TAACCTGGCC GCTGTTTTGC TGCTTTTGCT GGGCGGCTAC GGTAGCGCTC AAGCCGCCAT CGCGCCCGAT CGCACCCGCC TGGTATTTCG CGGCGAAGAT AAATCGATAA GCGTCGATCT GAAAAACGCC AACAGCAAAC TGCCCTATCT GGCGCAGTCC TGGGTGGAAG ATGAGAAGGG CGTCAAAATC ACCTCGCCTT TAATCGTCGT CCCACCGGTC CAGCGCATTG AGCCGTCGGC AATCGGACAG GTCAAAATTC AGGGGATGCC GGCGCTGGCG TCGCTCCCTA AGGATCGGGA AACCCTTTTT TATTACAACG TGCGCGAAAT TCCGCCGCAA AGCGACAAGC CCAATACGCT GCAAATCGCC CTGCAAACGC GCATCAAAGT TTTTTACCGC CCGCAGGCGC TATCGAAAAT CGATATGCAG CATCCCTGGC AATACAAGAT CACCCTTCAG CGTCAGGGCA ATGGCTATCA GGTGAGCAAT CCGACCGGTT ACTACGTGGT GTTAAGCAAC GCCAGCAACC GCATGGACGG CACACCAGCC AGAGGCTTTA GCCCTTTAGT GATTGCACCA AAAAGCAACG TGACGCTGGG AGGGGACGCC AGTGAATTAG GTCACTCGCC TGTGCTGACT TACGTCAACG ATTATGGCGC GCGGTTACCG CTGATTTTTA ACTGTACTGA CAACAGTTGT GCGGTAGATG AAGCAAAAAG CAGAAAGTCG TAA
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Protein sequence | MMPLKRYNLA AVLLLLLGGY GSAQAAIAPD RTRLVFRGED KSISVDLKNA NSKLPYLAQS WVEDEKGVKI TSPLIVVPPV QRIEPSAIGQ VKIQGMPALA SLPKDRETLF YYNVREIPPQ SDKPNTLQIA LQTRIKVFYR PQALSKIDMQ HPWQYKITLQ RQGNGYQVSN PTGYYVVLSN ASNRMDGTPA RGFSPLVIAP KSNVTLGGDA SELGHSPVLT YVNDYGARLP LIFNCTDNSC AVDEAKSRKS
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